HSHTPIII AVSESSAEIDELSTAQSTNVSTVATEVETLS----ATVQEIASTADEVVDTSATAERLAD CONSENSUS/80% thtpthpthtttstp.tpthtphstphpp.s....tshpphstshtphsttsppstthsp CONSENSUS/65% plspsspphpssspc.spphpplupphpphu....sslccsAushpphspssppssptup CONSENSUS/50% clspussslssuus-pucslcsluscscphu....AolE-lAusssplucsucsuscsAs HSHTPIII DGSAAASDAADMMADVATAADSVTSDVEALQNRIEDIDEVVDVITGIAEQTNMLALNASI CONSENSUS/80% tupp.htpshtthtthtp.htps.pthppltppsppIsplhtlIspIu.QTNhLALNAul CONSENSUS/65% puppssppshpphpphpptsppsspshppltppsppIspllslIssIApQTNLLALNAuI CONSENSUS/50% cGpcslscstssssslscslcsussslccLscsoscIucIlsVIs-IA-QTNLLALNAuI HSHTPIII EAARAGE----VGEGFAVVAEEVKALAEDAQSNAGHIESLVSEIQRDTADTVTDLVTTTD CONSENSUS/80% EAARAG-....tGcGFAVVApEV+pLApcotpustcItphltt..............s.p CONSENSUS/65% EAARAGE....sG+GFAVVA-EVRpLApcotpuup-Ippllpp..............spp CONSENSUS/50% EAARAGE....uG+GFAVVADEVRcLAc+SscuAcEIcsLIsslptpstpsht.hptoss HSHTPIII RIEDAVAQVEDAMASFEEIVTAVEATAEGIEQVSDATNEQAASAEEIAAMVDETADLADD CONSENSUS/80% phttssthsppshpshppI.t.htphsp.hpplstsspppsts.pplstshtphsthspp CONSENSUS/65% plppusphsppsspshppIsptlpplsshlppIssuspcQusshpplspslpplsplspp CONSENSUS/50% pVssGsstlccoscuLpcIssplsclsstlppIusAocEQusulp-lssslsclsslopc HSHTPIII I--------------TTAVADIVSQTEAQSTILXDLDESVSELH CONSENSUS/80% s..............ts.hpp.ttsstphtt.htpltp.htthp CONSENSUS/65% s..............ushhpchssusppltptsppLpphlppFp CONSENSUS/50% s..............uAss--ssuuspsLsspuscLp-hlspF+
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |