CT153_CHLTR/1-1 KNTVTCSTAAHSLYTLKEDD-SSNPSEKRLDSCFRNWIENKLSANSPD---SWSAFIQKF CONSENSUS/80% ...h.h.thp.h.h.hp........lt..h.pshp.lspp.p.s........h.thhppa CONSENSUS/65% hhhhspsplcsthaph+ts...phsls.tFhpslptLspphstu.......thtphlppa CONSENSUS/50% phhhscssVcsstYsh+ss...slsLstcFpcsl+sLPcpassu.......sascFIccY CT153_CHLTR/1-1 GTHYIASATFGGIGFQVLKLSFEQVEDL----HSKKISLETA--------AANSLLKGSV CONSENSUS/80% GTHhltpsphGu.....hhh.ptpht........pphptpht................ph CONSENSUS/65% GTHalsusshGGththhhhhsppphppp....ptpchppshs............hhthph CONSENSUS/50% GTHYIsSuoLGGchsllhthscpplcpps..hppcclsssls...t......pshhssul CT153_CHLTR/1-1 SSS------TESGYSSYSSTSS-------------SHTVFLGG------TVLPS------ CONSENSUS/80% tst.......t.t...t..tp..................hhsG......phh....h... CONSENSUS/65% usc.....hhptttthpttssp.............tps.hhGG.....hpshts..hs.. CONSENSUS/50% uuc....tspppupspcppuopp.........hcpscsplhGG....hhsstsshphs.. CT153_CHLTR/1-1 ----VHDERLDFKDWSESVHLE--PVPIQV-SLQPITNLLVPLHFPNIGAAELSNKRESL CONSENSUS/80% ...........h.ph.psl..p..s..lph.ph.slh.ll...............hpp.h CONSENSUS/65% .....ttpshphpsWspSl.sp..Psllch.pltPlhpLl.p.............t+ptl CONSENSUS/50% .....sssspsassWscSlsss..PllIcl.cLpPIasLlsss.........hps++csL CT153_CHLTR/1-1 QQAIRVYLK CONSENSUS/80% tpAh..hh. CONSENSUS/65% ppAlppYlp CONSENSUS/50% ccAlppYlp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |