Q9VLA6/57-147 RFVNLVRTHKCLYDKK-VPEYRNRDNQEK------AWVLISKET------------RESV CONSENSUS/80% phlp.hppp.hlas.p...thtttt.ttt......hatpls.tht..............h CONSENSUS/65% pLIphlcppssLastp.p.papppphppp......sWppluppls..............s CONSENSUS/50% cLIctV+cpPsLW-pp.pssa+sppsccp......sWpcIupclshs............s Q9VLA6/57-147 IHCKERWRNLR---ACLSRYIK----QQSGSEPQH----KPYYLT---EHMAFLLPFLK CONSENSUS/80% t.hhpphppl+...ppahpthp....................a....hpthtFlp.h.t CONSENSUS/65% ppspp+apsLR...spYp+phcphp.ttttt.........ttW...hhcphpFLpshhp CONSENSUS/50% cps+c+W+sLR...spYp+El++hp.spptst........spWp..aaccLpFLcshhp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |