Consensus terms for the MANEC domain

BC099367         QQQPACDGY------EVLDGVGLPAIGTPARQLMIELDSSRVANSEQD------CWDLCC
CONSENSUS/80%    ...t.C.tt.......hh.sh.llphptoht.Ghph.tt..thts.pp......ChttCC
CONSENSUS/65%    sstpsChst......psh.sh.llcsppShshGtpaLptshplpshc-......ChpuCC
CONSENSUS/50%    sstcsChsp.....hpshsss.lIcsppSlutGAcFLssPsplsohc-......ClpACC


BC099367         STER------CELAEMS---------EGN------CKLISCMYSGFNMC---ELK---NK
CONSENSUS/80%    pp.p......Cslhlhp........t.st......CaLhpC...tp.hC....ht....t
CONSENSUS/65%    sppp......Cslslhp......t.tpss......CaLhpC...sppsC...php...st
CONSENSUS/50%    ossc......CslAla-...h.tssssss......CYLFsCh.PucpsC...+as...Pp


BC099367         EGVRSF
CONSENSUS/80%    tsh.sh
CONSENSUS/65%    puhhoa
CONSENSUS/50%    cGasoY

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T