AAC69438/1-104 WSWESYL-----EEQKAITAPVSLFQ-----DSQAVTHNKNGFKL-------GMKLEGID CONSENSUS/80% hpWttal.....p.tts.shs.thF...............p.Fp........sh+LEshs CONSENSUS/65% hsWppaL.....ppssupssP.phF........t.s....ptFph.......GM+LEslD CONSENSUS/50% asWccYL.....ccsuupsAPsclF........pssssspssF+l.......GMKLEAlD AAC69438/1-104 P-----------QHPSMYFILTVAEVCGY-RLRLHFD------------GYSEC------ CONSENSUS/80% .............pst.hhhAol.plhst.hhhlph-............t.pp....... CONSENSUS/65% h...........pssphhplAoVhplhut.hlhlpa-............uhcst...... CONSENSUS/50% h...........psPsplsVATVscVpGp.RLpl+aD............Gh-cp...... AAC69438/1-104 HDFWVNANSPDIHPAGWFEKTGHKLQLP CONSENSUS/80% .phhhphpS..laPhGast.psh.lpsP CONSENSUS/65% h-aWhchpSstIaPlGWsptsuh.LpsP CONSENSUS/50% aDFWlcscSs-IaPlGWCppsGasLpPP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |