CC19_SCHPO/295-810TCFTLRDLRQSHLNCLVRVSGVVTRRTGLFPQLKYIRFTCTKCGATLGPFFQD-SSVEVK CONSENSUS/80% t..thRplptp.lspLlpltGhlhpso.lhsph.hh.h.Cp.Cthhh....p..p.h.h. CONSENSUS/65% phhslRsLpssclspLlplpGlVs+so.VhPchthsha.Cp.Cstshts.hp..sshhs. CONSENSUS/50% pspslR-L+us+lupLVslsGlVTRsSsV+PclstupasCcpCusTlsshhp..usppsp CC19_SCHPO/295-810ISFCHN--CSSRGP------------------------FVINSER-TVYNNYQRITLQES CONSENSUS/80% ...s....C...t.........................h.h..tp.oha.shQhlplQE. CONSENSUS/65% .hhC.s..Ctssst........................h.l.hsp.SpahcaQpl+lQEh CONSENSUS/50% .spCssppCpssss........................aplpts+.SpFtDaQcl+lQEs CC19_SCHPO/295-810PGTVPSGRLPRHREVILLADLVDVAKPGEEIDVTGIYRNN---FDASLNTKNGFP----- CONSENSUS/80% st.hPsGphPRphplhh.splscpspsG-chplsGlahs.....t.t..h.ps....... CONSENSUS/65% PpplPsGplPRolslhlps-LV-pspPGD+lploGIapsh...hshphssspuh...... CONSENSUS/50% P-pVPsGplPRSl-VIlcuDLVDps+PGDRVcVTGIapsl...sssptssssuhst.... CC19_SCHPO/295-810----------VFATIIEANHISQLDG--SGNTDD-------------------------- CONSENSUS/80% .............Thl.s..lt...................................... CONSENSUS/65% ............hThlcustl+.hthpht............................... CONSENSUS/50% ...........htThlcAsaV+chshphsttsst.......................... CC19_SCHPO/295-810-----------------DFSLSRLTDDEEREIRALAKS--PDIHNRIIASMAPSIYGHRS CONSENSUS/80% .......................hopp-.t.hpthspp...plhphlstSlAPsIaGpc. CONSENSUS/65% .....................ptho---.pplcplu+s..tcIa-plspSlAPSIYGp-c CONSENSUS/50% ............tp.......pphS-EElccl+clS+c..cDIY-+LusSlAPSIYGH-D CC19_SCHPO/295-810IKTAIAAALFGGVPKNINGKH--KIRGDINVLLLGDPGTAKSQFLKYVEKTAHRAVFATG CONSENSUS/80% lK+ulhh.LhGGstK...tth..phRGDINlhlhGDPusuKSQhL+al.phushulaToG CONSENSUS/65% lKKullhhLhGGspKphtstt..+lRGDINlLLhGDPuTAKSQlLKaVpchuPRulaToG CONSENSUS/50% IKKAILLhLhGGscKslscGt..+lRGDINlLLlGDPGTAKSQlLKYVc+lAPRAVYTTG CC19_SCHPO/295-810QGASAVGLTASVRKDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQS CONSENSUS/80% pGuSusGLTA.Vh+D..otphhlEuGAhVLADtGlshIDEFDKMs-tDRsuIHEsMEQQo CONSENSUS/65% +GSSAVGLTAuVh+D..TtEhhLEuGALVLADpGlCCIDEFDKMs-pDRsuIHEsMEQQT CONSENSUS/50% KGSSAVGLTAuVpRDspTcEasLEuGALVLADsGVCCIDEFDKMsDsDRoAIHEAMEQQT CC19_SCHPO/295-810ISISKAGIVTTLQARCTIIAAANPIGGRYNTTIPFNQNVELTEPILSRFDILQVVKDTVN CONSENSUS/80% loIuKAGIhspLpARsollAAANPlhGRYs..hs..pNlph..sllSRFDllhllhDphs CONSENSUS/65% ISIAKAGIhToLNARsSlLAAANPlhGRYs.phs.tpNIsLssslLSRFDllallhDchs CONSENSUS/50% ISIAKAGIpTTLNARsSVLAAANPltGRYDsp+osp-NIsLsssILSRFDLLFlVlDcsD CC19_SCHPO/295-810PEIDEQLANFVVSSHIRSHPAFDPN------------------MDVLK---KVPTETG-- CONSENSUS/80% ...D.plApallt.Hh...............................tt........... CONSENSUS/65% cppDppLAcHllphHhtp..........................pthpp.t......... CONSENSUS/50% EcpDccLAcHVlslHhppps........................psspssps........ CC19_SCHPO/295-810-----IDAK--------------------------PIPQDLLRKYIHFAREKVFPRLQQM CONSENSUS/80% ....................................hs.thhppYIths+..hhPhlst. CONSENSUS/65% ....................................lshphl++YItYA+p.htPhLspp CONSENSUS/50% ....................................lsh-hL++YIsYARpplpPpLopE CC19_SCHPO/295-810DEEKISRLYSDMRRESLATG-------SYPITVRHLESAIRLS--EAFAKMQLSEFVRPS CONSENSUS/80% stphlsp.Y.thRp....s........o..hTsRpLEuhlRlu..pAhA+hph...hp.. CONSENSUS/65% stchlsptYsplRppsttst.....h.o..lTsRpLEohIRlu..cAhA+h+hsphlp.t CONSENSUS/50% As-clsctYsclR+-sspstt.t.ptsShPITVRpLESlIRLS..EAhAKh+LuchVsps CC19_SCHPO/295-810HIDKAIQVIIDSFV CONSENSUS/80% chppAhpLh..uhh CONSENSUS/65% clpcAlcLhp.uhh CONSENSUS/50% DV-EAlRLlppShl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |