376686.Fjoh_1459_from_19_to_13GLEPIVRKLH----EQNVTLYSTGG----TQDFIKNLGIPVVPVEDITSFPEILGGRVKT CONSENSUS/80% thh.hspt......t.shplhuTtu......thltttu...............lt...tt CONSENSUS/65% tllphA+t......phGaclluTuG.....tphLppsG...............ls...pp CONSENSUS/50% sllchA+p....h.chGacLlATGGT....AchLccsG...............lcsp.cs 376686.Fjoh_1459_from_19_to_13LHPKIFGGILNRQD---------NESDVQQMKEFDIPQIDLVIVDLYPFE---------- CONSENSUS/80% h...ltts......................ht.ht.t.lphlls................ CONSENSUS/65% lhsclptG..................p.thhshht.splclllssh.............. CONSENSUS/50% lpsKlpuGh.................c.plhctlspscIDLVlssh.sh........... 376686.Fjoh_1459_from_19_to_13----KTVASG-----ASEQDIIEKIDIGGIS CONSENSUS/80% ....tt........shthtphh..hplsh.s CONSENSUS/65% ....tp.spt....shslccss.phsIshhT CONSENSUS/50% ....sssscs...DutslccsstshcIsssT
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |