Consensus terms for the MHC_II_beta domain

7955.ENSDARP00000089479_from_3QQCFYST-SDYSDMVYLAS-YSFNKVVDTQFNSSVGKFV--GYTEQGLIF---AENFNKD
CONSENSUS/80%    tpChh.s.us.pphphh.p..haNpp.hhpasSphGphh..shs.hGh.t...up.hNpp
CONSENSUS/65%    spCaass.Gs.pchcalhp.hhaN+-Ehs+FDScVGcah..uhTcLGp.s...A-hWNpp
CONSENSUS/50%    u-CaFsN.GT.ccVRaltR.ahYN+EEhsRFDS-VGcat..AlTELGRss...AEaWNsQ


7955.ENSDARP00000089479_from_3QAYLHQLKAQVDTFCRHNAQIWD
CONSENSUS/80%    pphlpph+sthpp.Cptpht...
CONSENSUS/65%    c-hLcptRutl-shC+pNhphh.
CONSENSUS/50%    c-hLEcpRAsVDshCRHNYclhp

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T