Consensus terms for the MIR domain 

PMT1_YEAST/1-61  FQNLTDG-TKVRLF-HTVTR-CRLHSHDHK------------------------PPVSES
CONSENSUS/80%    .t.lh.s.p.hplh.phtst.thLt.pt................................
CONSENSUS/65%    sthlthG.shl+Lp.Hhsos.phLpspptp..............................
CONSENSUS/50%    sphlphG.splRL+.HlsTu.sYLaoccpp...........................ht.


PMT1_YEAST/1-61  SDWQKEVSCYGYSGFDG-------------------------------------------
CONSENSUS/80%    ..tptplshh..................................................
CONSENSUS/65%    sptppcVsshtt................................................
CONSENSUS/50%    ussQp-Voshsss...............................................


PMT1_YEAST/1-61  -------DANDDWVVEID
CONSENSUS/80%    ........tps.W.h...
CONSENSUS/65%    .......stsshWhlp.h
CONSENSUS/50%    .......sssshWhlpss

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T