272620.KPN_02539_from_150_to_2PEEYAAFAE---KLVAR----GYKAIKLHTWMP--------------------------- CONSENSUS/80% .tthht.ht....h........hthhKhchs............................. CONSENSUS/65% spphtpthp...hhtt.....tapshKlKlu............................. CONSENSUS/50% s-chsctsc...thspt....GasslKlKlGh............................ 272620.KPN_02539_from_150_to_2--------------PISFAPNPKMDIKACA--------------------AVREAVG--- CONSENSUS/80% ..............................................thhttlpt.h.... CONSENSUS/65% ............................................-hthltslRpth.... CONSENSUS/50% ...........................................pDlpplcAlRcsls... 272620.KPN_02539_from_150_to_2---------------------PDIDLMIDGY---HWYS----------RAEALWIGKELE CONSENSUS/80% .........................hhlDsp................ths...phhthht CONSENSUS/65% .....................sthtlhlDsN...............tsas.htpshphhp CONSENSUS/50% .....................sshplhlDAN...............tuas.sppAlctlc 272620.KPN_02539_from_150_to_2KLN-----------FAWFEEPMEED------SMSSYAWLAENLSIP CONSENSUS/80% .ht...........h.hhEpPh............thttlttth.hs CONSENSUS/65% tht...........lhalEpPh.s.........tshttlppthshs CONSENSUS/50% pLc...........ltalE-Pl.ssp.......puhuplpcpsssP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |