Q52882/1-2 RRDLTEIAAMIYADAGIYLNESKASLVYSRLSKHIRNLGLKGFRDYCQLVASPA-GAAAR CONSENSUS/80% .tthpph.thl.ppsGl.hsp.+t.hl.t+lt.hht.hshpshpphhphl.ptt...t.h CONSENSUS/65% ttphpphsphlhppsGlslsc.+pthltpRLpthhchhuhpshppahphlpsst...tph CONSENSUS/50% sc-apclssllpscoGIsLs-pKcshlpuRLssRl+sLGlcsFscYlchLposp.tpsEl Q52882/1-2 RDMLSHLTTNFTRFFRENHHFEHLKTDVLPGLIAR----AKNGGRVRIWSAACSDGQEPY CONSENSUS/80% tthls.hohs.TtFaRc.ttFphl.p.lls.hh..........t.lplWSAuCSsGpEsY CONSENSUS/65% tthlsthTsshTpFFR-ttpFchLtppllPtlhtp.......tppl+lWSAuCSoGEEsY CONSENSUS/50% pslL-plTTNcTcFFR-sccF-hLpccVLPcLhsp....ttps+clRIWSAGCSoGEEPY Q52882/1-2 SIALTVLSLLPN--AADYDFRILATDIDPKILALARAGAYDATAL-ETVNPAMRKQWFSE CONSENSUS/80% olAhhhhp.h........thtlhuoDls.thlthA+tGha.tptl.tsls.thhtpahtt CONSENSUS/65% SlAhsltctht....h.hphpIhATDIs.pslppA+tGhYstppl.psls.thht+aFpp CONSENSUS/50% SLAMlLs-shsp..ttphclcIlATDI-scsL-cA+pGhYsscpL.psLPsshlc+YFsc Q52882/1-2 VEAG-GRRKWQVDDRVKRLITFNELNLMAQWP---IKGPFDVIFCRNVVIYFDEPTQMKI CONSENSUS/80% .ts......hplpttl+phl.Ft.hNLht........t.hDlIhCRNlhIYFs..sptpl CONSENSUS/65% sss......aplpspl+phlpFphhNLhsp......hsphDlIhCRNVlIYFc.psppcl CONSENSUS/50% ssc....tpYcV+s-L+cpVpFccpNLhs-ps...hhucFDlIFCRNVLIYFDcco+p+l Q52882/1-2 WSRFAGVLDNGGHLYIGHSERVSGDAK-ALFDNIGITTYRHT CONSENSUS/80% hpphhthLtssGhLhlGtuEth.t......hp.ht.p.hhh. CONSENSUS/65% hpchtttLpssGhLhlGpSEslstsp...pFc.lshpthhhp CONSENSUS/50% Lc+FussL+PGGaLalGpSEolssspc..cFchlsssshhhp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |