5141.NCU00962.1_from_373_to_436TFKPPPRVT-------LTDTKKEVWLKDLANSAIPLRKLSRS-IPHG--VRNKVLLDQCL CONSENSUS/80% ta..............hstpphp.ahptLut.thsL.tLscp.lPth...+pc.lht.hh CONSENSUS/65% sap.s.t.........hscsc+ptWhp-Lus.shsLppLucp.lPph..h++cplhcthh CONSENSUS/50% sFc.PsRlp.......tocs+R-sWlcDLAssstPLppLu++.lPHG..hR++pLl-pLh 5141.NCU00962.1_from_373_to_436N---------------------------------------------KNVPIDRAVWLAK CONSENSUS/80% p..............................................plPh.RAhWhhK CONSENSUS/65% p.............................................hplPh.RAhWhlK CONSENSUS/50% c.............................................psVPlsRAlWhlK
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |