B6FKS6_9FIRM/6-219KADMSCARVKKYT.ASDVSKAERHNERKNETY...ENMNVIEERIPYNVHFKKP.FAPTY CONSENSUS/80% hs.htlh+hpKh+.tsshtthtpHspR..pp....ps.slp.pcp..Nhphhs.....ph CONSENSUS/65% Ms.aslhRhpKhK.ssslsuhppHspRptpp....pNp-Is.c+othNh-Lhst.pp.pa CONSENSUS/50% Mu.aulsRhpKhK.uuslsGlppHNQRpscsp...sNcDIDh-RopLNYDLlNs.pshsY B6FKS6_9FIRM/6-219MEQLKQMETDGMVSL.RGLRKDATLFNEIVIDVNTMYFERNGGYEYAKQFYEEAFHFIEE CONSENSUS/80% ppplcthhpp......cthRpsuhhh.-hllsss.ca..pphs.pc.cpahppshphhtp CONSENSUS/65% pppIcphlppph..p.RtlRpDAlhh.-hllouss-ah.pphs.cct+caFcpuhpahpp CONSENSUS/50% cccI-chIccptsup.RslRKDAVltsEhlITuss-FF.cshotEEp+caFEsAhcahcc B6FKS6_9FIRM/6-219KFGA.DNVISAVMHADEINVAATEELGKEVYHYHLHA.....MVLPVVEKEILWSKRCKD CONSENSUS/80% paGt.pshh.AhlHhDEt...........oPHhHht.......hhPhp-pt.....+hps CONSENSUS/65% caGp.pNlh.AslHhDEt...........TPHMHhs.......lVPhp-ct.....+Lsu CONSENSUS/50% +YGc.-NllYAsVHhDEs...........TPHMHhG.......lVPhs--p.....+LSA B6FKS6_9FIRM/6-219EKLRGTVKEVVHQIS....HSKKWKSDIPLTDEKGNP....LLRKNGKPMFRAS CONSENSUS/80% cthhs.cpth.thps....ch.p.h..pththpRG......pptcp.ts.tact CONSENSUS/65% +plhs.+ptLpphQs....ch.chhtppGaplpRGp.....oc+KphsstpaKt CONSENSUS/50% Kclast++sLpplQ-....cascalspcGa-L-RGppt...o-RKHlssscYKs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |