222929.C5P693_from_289_to_466FKCEPIPLKTVRPFVMKEIVLSEEKEAQRLLRKE-----------NNRTEL-TRFLMGL- CONSENSUS/80% hphp.l.LpoVRsFhhcpl.Ltp........................tttl..thh.t.. CONSENSUS/65% achp.IsLpTVRPFhhc-lsLtp.....tht..............pspppl.ppalppp. CONSENSUS/50% F+lcsIPL+TVRPFlh--lsLs-....hsls.s............ssppcl.pcaLppc. 222929.C5P693_from_289_to_466-----------VDE-LIEK----AKNDWL-------------------ASQDDFDGDESE CONSENSUS/80% ...........lpt.hlpp....up................................... CONSENSUS/65% ...........Vcp.hIpc....Aptph...............................p CONSENSUS/50% ...........V-p.hI-c....Acpphp..........................t..pp 222929.C5P693_from_289_to_466I----------------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 222929.C5P693_from_289_to_466------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 222929.C5P693_from_289_to_466----------PLPLVRLRVDTSTPEGG----SFDCENPQRFSNRFVGRVANVNDVVQFHR CONSENSUS/80% ...........hPLlRL+lcao.........thp..Ns.RFuppa.spVANsp-hl.ah+ CONSENSUS/65% ...........LPLIRL+V-Yos........shphhNspRFupcFss+VANspDllhFh+ CONSENSUS/50% ..........pLPLIRLRV-You........sapshNspRFGp+FVG+VANPsDllpFaK 222929.C5P693_from_289_to_466KKKA-------TTA----ARGKT-DAPGETILSQLSSLDT-------------------- CONSENSUS/80% ............t............................................... CONSENSUS/65% pp.........ppt..........t....t.....tt....................... CONSENSUS/50% ++t...pt...psptpt.ttht.ppthtpsthtpppsh...................... 222929.C5P693_from_289_to_466-----VKVERLVRE----------FLT------AQSL----TILPQNSFGDAVSQF CONSENSUS/80% ......phpphltc..........hh.......t.pl....plL..tthspsltpa CONSENSUS/65% .....hplpsllpc..........hhp......ptpL....plLsppslscAlppF CONSENSUS/50% .....hcVEcLVs-..........ahs......pppL....slLscsulu-AlccF
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |