4896.SPBC27B12.04c-1_from_28_to_310HKPMEFKGT-SKDDLEDDLNSFFDCEEELFLSANKIFYSKLRVYQTVRHWSLKQ------ CONSENSUS/80% psthta.as.D.tsh.pElsEhaphs-..th..........p.app.............. CONSENSUS/65% psshsFpYs.DtsshtpElsEhasYs-hspht......h.ppsF-pph............ CONSENSUS/50% pPsL-FcYs.DscsassEluEWFoYoEhscht......ts+csFEcpapph.hp...... 4896.SPBC27B12.04c-1_from_28_to_310------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 4896.SPBC27B12.04c-1_from_28_to_310NWSSMSLDQKRNFILHCHHELSSG-ELLRN------SALYSILYIAAGAYDSV------- CONSENSUS/80% th.ths.t.ppthh.thhptlp...t...p......pshttlhYhs.Ghasps....... CONSENSUS/65% pW.phsps.p+shl.pllpplpss.shthRh.....pshcslhYlstGsau-s....... CONSENSUS/50% sWpcsspsp++saltpLlcsLcss.ctptRh.....cul+slLYlupGsau-s....... 4896.SPBC27B12.04c-1_from_28_to_310-GSFEEHV----------------------HSISENVYLLR--EFDIPKTVYSLF-IEWN CONSENSUS/80% .p..tpt.......................p.hppNs.hl...p.shh..hhphlph.hp CONSENSUS/65% .ps.p-ph......................phhcpNshlLh..phushtslhphLphthc CONSENSUS/50% .sosp-ph......................chh+cNstLLh..csushsslh-lLppth- 4896.SPBC27B12.04c-1_from_28_to_310RT--------------------------------RKHSFL-DNSRDEGFLNLLLS--LMF CONSENSUS/80% tt................................pt.th....pp....h..hhs..hhY CONSENSUS/65% pt...............tssts............pp.sls.hhcppp..h.hlLs..lhY CONSENSUS/50% ps..............tsssss............ccsslu.hs-ssp..LpllLo..lLY 4896.SPBC27B12.04c-1_from_28_to_310FFLTLN--------NTDKTWIHSIRSLNPPV-------LPTLVKLFIDITSDYQLNLDK- CONSENSUS/80% hhlphh........tc..t.....p.hh..........p..h..hlhthltphp.tt... CONSENSUS/65% hhlpsh.......tpcspp.t.hppthtt.........p.sLhhhLhphls+hp.ss... CONSENSUS/50% hhlEls..p.t.pppDsps.psh+cshtstl.......cssLllhLhshls+a+hss... 4896.SPBC27B12.04c-1_from_28_to_310-------------VIHSSLK----------------------KLSFLIFKVCIRLWGSQS CONSENSUS/80% .............t.ph.hp......................pllhlhaK.llh.hGs.p CONSENSUS/65% .............ssphPh+......................pllLLlWKhlLhthGG.c CONSENSUS/50% .............ussaPl+......................+llLLLWKslLlshGGpc 4896.SPBC27B12.04c-1_from_28_to_310YLQEKKAGLAEVLNIS---------TSQQKPKTTALDYEVF---RHEMATKFSS------ CONSENSUS/80% phpphct.hp..hth....t......tt..hsssPhsh..h...tpphhpp......... CONSENSUS/65% pLcphKphhcphhsl....pss....pp.hhsssPlshtsh...ppchps+hPt...... CONSENSUS/50% cL+csKcth+cptuls.tp-cs...scs.plouSPL-YpsF...RQ-lss+aPs...... 4896.SPBC27B12.04c-1_from_28_to_310----------FADSYYPVP--------LDREQ---------------------------- CONSENSUS/80% .............s..............p.pp CONSENSUS/65% ..........hp.s...h.........hch-s CONSENSUS/50% ..........assPpshlP........h-h-s 4896.SPBC27B12.04c-1_from_28_to_310------------------------------------------------------------ CONSENSUS/80% CONSENSUS/65% CONSENSUS/50% 4896.SPBC27B12.04c-1_from_28_to_310--------- CONSENSUS/80% CONSENSUS/65% CONSENSUS/50%
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |