NDK_ARCFU/1-138 MERTFVMVKPDGVQRGLVGEVIGRLERK-GLKIVAMKMLWIARE--MAENHYA-----EH CONSENSUS/80% hppTh.hlKPDult+thhsplltphppt.Ghplhsh+hh.hstt...sptaYt......h CONSENSUS/65% hE+ThhhIKPDuVp+sllGcIls+hEcp.GaclluhKhhphspc...AcpaYt.....-+ CONSENSUS/50% hERTallIKPDuVpRsLlG-IIuRFEc+.GF+lVAhKhlploc-..pAEpaYs.....EH NDK_ARCFU/1-138 REKPFFSALVDYI--------------------------TSGPVVAMVV----EGKNAIK CONSENSUS/80% pt+sFattLlpah..........................sSGPlhshlh....ptpsslt CONSENSUS/65% cs+PFapsLlpah..........................oSGPllshVl....EGcsslp CONSENSUS/50% cuKPFFscLVcFM..........................oSGPVVAMVl....EG-sAVp NDK_ARCFU/1-138 V----VRTLVGATN----------PAEAAPGTIRGDFGL-DVGR---------------- CONSENSUS/80% ......RphhGsTs..........sttttssolRupauh.ph.t................ CONSENSUS/65% t....hRplhGsTs..........stputPGTIRuDFuh.shsc................ CONSENSUS/50% s....sRpLlGuTs..........PpcAuPGTIRGDFul.sls+................ NDK_ARCFU/1-138 ---------------------NVVHASDSPQS--AEREISLFFSDDEIVN CONSENSUS/80% .....................NhhHuSDu.ps..AtcElthaF.t.ph.. CONSENSUS/65% .....................NslHGSDS.-o..ApREIshaFtptElht CONSENSUS/50% .....................NllHGSDSsES..AcREIulaFscsElss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |