NUSG_BACHD/2-11 EKNWYVVHTYSG--YENKVKTNLEKRVESMDMT---------DKIFRVMVP--VEEETEV CONSENSUS/80% ..paahlpsh.u...ctpstt.l.pt..................hhphhhP....tl... CONSENSUS/65% .tpWYhlpshsG..tEppltptlppph.t.th............hhplhsP...ppltth CONSENSUS/50% pppWYlV+spsG..pEccVpcsLcc+hpshshp.........t.lhslllP..h-slpch NUSG_BACHD/2-11 K----------------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% h........................................................... CONSENSUS/50% p........................................................... NUSG_BACHD/2-11 -----------------------------------------------NGKSKQVS----- CONSENSUS/80% ............................................................ CONSENSUS/65% ...............................................t.ph......... CONSENSUS/50% ...............................................puptp.sp..... NUSG_BACHD/2-11 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ NUSG_BACHD/2-11 RKVFPGYVLVEMVMTDDS---------WYVVRNTPGVTGFVGSAGA--------GSKPTP CONSENSUS/80% .....uYlhlch..pp...........hthlpsh.tlhthlt.................. CONSENSUS/65% ..hhPGYlhlchphpsts.........hphlcss.slpsFlss...........t.tPhs CONSENSUS/50% cthaPGYlalch-hsccs.........apsl+ssssVsGFVGu...........sspPts NUSG_BACHD/2-11 LLPEEVDAILRQM CONSENSUS/80% ls.p-h.phht.. CONSENSUS/65% lstpElppllp.h CONSENSUS/50% lspcElpclLppt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |