NUC1_SCHPO/10- NHGYMSVFDRRTRNPFYTAETITQESLNQR-----------------K-GNRRYSEFVPD CONSENSUS/80% .ttah.shs.pht.s.as...l..t...t......................ch.sphh.D CONSENSUS/65% pptah.sasppp+hshWss.plstpt.ts.....................pcppspah.D CONSENSUS/50% ppsasluYspcp+hPhWsu.plsssshsu....................s-+csssF+sD NUC1_SCHPO/10- DNIPE-MFQAKLGDYRGS-------GYDRGHQVPAADCKFS-----QEAMNETFYLSN-M CONSENSUS/80% .pls......t.t.Yhss.......ths+Ga.ssst.tt.s......pshtpshhhoN.h CONSENSUS/65% .pls..h.pspspsYhss.......shsRGHhssssspp.S.....ppshs-TahhoN.h CONSENSUS/50% sslPt.thpspssDYpuS.......GaDRGHLuPuuss+sS.....ppAhs-TFhLSN.h NUC1_SCHPO/10- CPQVGDG-FNRNYWAYFEDWCRRLTS--KYGSVTIMTGPLYLPKKNERGQ---------- CONSENSUS/80% sP.h.p....pthWt.hcthhhthht..phttl.lhoGPlh..phttht........... CONSENSUS/65% sPQh.p...NpshWthlEphhhphtp..phpslhlloGPla..phtstst.......... CONSENSUS/50% sPQssc..hNpshWspLEchsRcLss..ctssVaVVoGPlapschcucuct......... NUC1_SCHPO/10- ----------------------------------WEVQYRVIGN-PPNVAVPTHFFKVII CONSENSUS/80% .............................. ..............pl.lPophahlhh CONSENSUS/65% .............................. ...l...hhs...pslslPoHaapllh CONSENSUS/50% .............................. ...lphplhG..ssslslPTHFFKVlh NUC1_SCHPO/10- AEKSG-EPT----SSPSVAAFVLPNKPIADNFP-------------LKNFAVPVEVVERA CONSENSUS/80% tphs.s.........hth.shhhPpps.t.p...............hp.a.s.lptlEch CONSENSUS/65% spts.s.........hphhuallPNcs.ssp...............hptaplslpplE+h CONSENSUS/50% uspssu........th-lsuFllPNcPpssp.s.............LppapVsVc-lE+l NUC1_SCHPO/10- SGLEILSNVPKG CONSENSUS/80% ssl.hhtph..t CONSENSUS/65% oGL.ahpphsts CONSENSUS/50% TGLsFapclsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |