OLFM_RANCA/1-26 QGLAHISKPNLMQLNWKGNAYKSGAWGKDAAWNTTK-KSLYWVAPLNTDGRVLESIRIYP CONSENSUS/80% shLttlupPshhtput....t+.GuWh+Dsh.sp....pphWhhshhs..h..c.lhEYp CONSENSUS/65% shLttlupPshhtput....t+.GuWh+Dsh.sp....pphWhhshhs..h..c.lhEYp CONSENSUS/50% GlLsuVucPVplppSp...hu+sGuWM+DPLssosc.tc+hWhhDsss..psscslpEYs OLFM_RANCA/1-26 SMSDLQMYKNPIDLPLSMLIKNKLNNTFAGQGAGVVVHNNNLYYNCFNSHDMCRASLTSG CONSENSUS/80% shsph.tths.hsahLsh..........hhpGTG.VVYsGulYapphpo+sllRa-LpTt CONSENSUS/65% shsph.tths.hsahLsh..........hhpGTG.VVYsGulYapphpo+sllRa-LpTt CONSENSUS/50% ShsDFhsscsspsahLPa..........sssGTGsVVYNGSLYFNKapS+sllRa-LcTc OLFM_RANCA/1-26 VYQKKPLLN-ALFNNRFSY-----------------AGTMFQDMDFSSDEKGLWVIFTTE CONSENSUS/80% sh.tpt.ls.Asapsph.Y.................thssasDlDhuVDEsGLWsIYuTp CONSENSUS/65% sh.tpt.ls.Asapsph.Y.................thssasDlDhuVDEsGLWsIYuTp CONSENSUS/50% lhpcccllstAuYpspasY.................AWGG+oDIDLAVDENGLWVIYATE OLFM_RANCA/1-26 KSAGKIVVGKVNVATFTVDNIWI-TTQNKSDASNAFMICGVLYVTRS------LGPKMEE CONSENSUS/80% pssGpIVluKlsP.oLpl.shWp TshsKpssusAFhICGlLYsspS......htshtsp CONSENSUS/65% pssGpIVluKlsP.oLpl.shWp TshsKpssusAFhICGlLYsspS......htshtsp CONSENSUS/50% psuGsIVlSKLNPhoLpl-sTWs TshsKpSAuNAFlICGlLYVl+S......ssustsc OLFM_RANCA/1-26 VFYMFDTKT--------------------------------------------------- CONSENSUS/80% lpahYsTps................................................... CONSENSUS/65% lpahYsTps................................................... CONSENSUS/50% IsYAYDTso................................................... OLFM_RANCA/1-26 -----GKEGHLSIMMEKMAEKVHSLSYNSNDRKLYMFSEGYLLHYDIALKP CONSENSUS/80% .....uppthlsl.a.N.YphlshlcYNPhDptLYhasNhphlpYslplt. CONSENSUS/65% .....uppthlsl.a.N.YphlshlcYNPhDptLYhasNhphlpYslplt. CONSENSUS/50% .....ucsphlsIPFpNpYpaloMLDYNPpDR+LYsWsNuallpYslcLpc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |