199310.c2893_from_16_to_150LLLIVLTGVFYMKKSK----------------------------------------EIAV CONSENSUS/80% h.hhh..sh.htt...........................................pluh CONSENSUS/65% hhhhhsssststs...........................................+luh CONSENSUS/50% lshssssussssst..........................................KIul 199310.c2893_from_16_to_150VNIDAIYNQS--AAGDMVRKHLNE--VKS---------------------ILEKGYEDAQ CONSENSUS/80% lshttlhtp.....hpthttphpt....t.....................thttphptht CONSENSUS/65% lshpplhpp...sttpthppplpp..php.....................phppclpphp CONSENSUS/50% VDspcllppu..sss+ssppcLcp..chc.....................spps-Lpstp 199310.c2893_from_16_to_150KAFA--------------DNANKE---ALLLDARQKLERQC-VIE--------------- CONSENSUS/80% tphp...........t..pthptp...t..hsttthtthtt.ph................ CONSENSUS/65% pclp...........th.pphppp...tshhsppttppppp.cht............... CONSENSUS/50% pcLc...........shtccLp+c...usshopsp+pc+pc.-lp............... 199310.c2893_from_16_to_150----------------------ENSAKM----------------------VLSRAI---D CONSENSUS/80% ......th.pphpth.pth...ptphtt.......tptp.ht.........l.pph.... CONSENSUS/65% ......pttpphpphtpph...ppclpp.......pppc.hp........tlhppl...p CONSENSUS/50% ......pppp-hpcpppph...pp-lpp.......cps-thp........plhccl...p 199310.c2893_from_16_to_150NAIGTW----RKDNPKNIAVLSSG-----------------VVLAHNESA------DITK CONSENSUS/80% thlpph....sptpthshlhttt...................hhhst.th......Dlot CONSENSUS/65% pslppl....ucpcsaslllsppt..................llasssph......DlTs CONSENSUS/50% sulccl....AcccGYslVLspss..................llYusssh......DITc 199310.c2893_from_16_to_150EVMALVE CONSENSUS/80% pllp.ls CONSENSUS/65% cVlptls CONSENSUS/50% cVlcpLs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |