Q8PLM2/307-446 KAGALTARYAINGKHILERRESE-----------VNYQYLSDLTKYPKKAITKDKNSRMQ CONSENSUS/80% .t.Gh.ht.h.tt......................t....................tphs CONSENSUS/65% spsGl.hthahpptth.s................hpssth.sh.htst..sts.ttsphs CONSENSUS/50% sssGl.tshYtsssshssh.hh............hsssshsssttsspssspstssscau Q8PLM2/307-446 VTWEGEIEALTGGEHTF--SLY------SSEYAKLY------VDGKLVVDRW---RQNW- CONSENSUS/80% h.hpuhhhs..sGta.h...h.......ssss.thh......lssp.hlsp......... CONSENSUS/65% spasGhlpsspsGpYpF..tlt......ucsssplh......lsuphll-pt...s.t.. CONSENSUS/50% lcasGplpsspoGsYsF..pls......uDcus+La......lDGchllDss...sppt. Q8PLM2/307-446 ------------------NPWNHEFKLDLEPGQRHTVKVEWDLIDPSYI---------AL CONSENSUS/80% ........................tth.h.tutha.lcl.h.tt...............h CONSENSUS/65% .....................phptslthhsuphapl+lcahpttssth.........pl CONSENSUS/50% ...................ttsppsslsLpuGpsYsl+lEYtcpssssth........pL Q8PLM2/307-446 LHRDPLPAAEAKDLS CONSENSUS/80% .h..st..t...... CONSENSUS/65% tat.sshtttthstt CONSENSUS/50% sWssssssppsssps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |