PA20_BUNMU NLYQFKNMIVCAG--TRPWIGYVNYGCYCGAGGSGTP----VDELDRCCYVHDNCYGEAE CONSENSUS/80% sLhQFtpMI.phs..ppshhtas.YGCYCGhGGpGpP....hDthDRCC.sHDsCYtpht CONSENSUS/65% sLhQFtpMIppts..ppshhpYssYGCYCGhGGpGpP....hDshDRCChsHDsCYscsp CONSENSUS/50% NLhQFssMIpCsss.pcuhhsYusYGCYCGhGGpGTP....VD-LDRCCpVHDsCYucAs PA20_BUNMU KIPGCNP-----KTKTYSYTCT-KPNLTCTD---AAG-TCARIVCDCDRTAAICFAAA-- CONSENSUS/80% ...sC.s.....hhphYpaphp.ts..hCt.....ps..Ctt.lCpCDthAAhCFtts.. CONSENSUS/65% ...sCtP.....phshYoYppp.ssslsCst....ss..CtphlCpCD+sAAhCFucs.. CONSENSUS/50% +.tGCsP.....KhssYSYsCs.sGsIsCss...tss.tCpctVC-CD+sAAlCFucu.. PA20_BUNMU PYNINNFMISSSTHCQ------- CONSENSUS/80% sYpp.ph.h..p.hCp....... CONSENSUS/65% sYsptpaph.sppcCp....... CONSENSUS/50% sYNctsYslsscp+Cp.......
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |