PSD3_DROME/165 KNSLEGIRSFLHARLRTATLRNDFEGQAVLINCLLRNYLHYALYDQADKLVKKSVYPE-- CONSENSUS/80% ......hh.h..sh.t.ts.++...s.h.lhs.lhp.ahp.p.hp.sp.hh.ps...... CONSENSUS/65% ph..s.hhthh.shhpttsh++...u.hhllNhLh+hYhchsphchsppll.+shpsp.. CONSENSUS/50% psppstppsslsupt+ssss++c.hGphsLlNLLl+sYl+hsphclucsLl.Kslpss.. PSD3_DROME/165 ------------SASNNEWARFLYYLGRIK-AAKLEYSDAHKHLVQALRKSPQHAA---- CONSENSUS/80% .............hs.sp.stahaahGphh.hhp.pappAtt.h..Ahpps.tt...... CONSENSUS/65% ............thspsphspYhYYlG+ht.hhphcYppAcppl..Ahppssppsh.... CONSENSUS/50% ..........hssaossptlcYpYYLGRlp.slct-YssAccaLspAhRpsPpsut.... PSD3_DROME/165 ----IGFRQTVQKLIIVVELLLGN--IPERVVFRQAGLRQSLGAYFQLTQ---------- CONSENSUS/80% .....t.h..h.hhhlshthlhsp..hPppt.htp..h.t....ah.lh........... CONSENSUS/65% .....t.+phlhphhlslpLLhGc..hPpcplhpphthpp....ahplsp.......... CONSENSUS/50% .....ua+cplLKaLlsVcLLLGc..lPc+slhcphshpcs..sYhcLsp.......... PSD3_DROME/165 -----------------AVRLGNLKRFGDVVSQYGPKF--QLDHTFT CONSENSUS/80% .................ul+.Gslt.atthhpp.pt.h...tptha. CONSENSUS/65% .................AV+tGslptFppslpphcphF..hpcshah CONSENSUS/50% .................AVRpGNLpcFccsLppacspF..h+cGlYl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |