289380.CPR_1775_from_279_to_36FESKQVATKDGE---IEQIPMNQTGD-KFIIGKA--KNDLTLVCPK-GMSDKIEKKVVLD CONSENSUS/80% ap.hphhttsp....htp.tl.hGtt.ppl.hhh..tpsh.hhh.p.tp.tph.hph.h. CONSENSUS/65% Fcshplhptsp....hsphpVhtGpp.ppltlss..tpshhlslsc.sptpphpsphhhp CONSENSUS/50% F-otplacsGps...lssscVapGcp.cpVslss..scDlslslP+.Gppcclcsclshs 289380.CPR_1775_from_279_to_36ES------KK--KIKEF-DTIGYCEYYLD--------GEL-------LGKVELYSDRDMK CONSENSUS/80% t........l.APlttG.p.lGph.hh..........s.........h.phslhs.pplt CONSENSUS/65% p........lpAPlpcG.phlGpl.hhhh.......tsp........ltphsLluhpsVp CONSENSUS/50% ss.......lpAPlpKG.ppVGpl.hhpt.......sGch.......lsclPLlAtccVc 289380.CPR_1775_from_279_to_36K CONSENSUS/80% p CONSENSUS/65% c CONSENSUS/50% c
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |