368407.Memar_0679_from_5_to_22RLRAVGDVLLWIRNGKR--------------PFALVQHELRQ------------------ CONSENSUS/80% pl.hsGDlhhtt.................................ht............. CONSENSUS/65% plhhsGDlhhtp..........................t.shs.hht............. CONSENSUS/50% slshsGDlhhssthh...................t.tsphshsshapth........... 368407.Memar_0679_from_5_to_22----------------------------KDLLFGNLETVLSESGSESRKRW--------- CONSENSUS/80% .........................httsDhhhsNhEsshst.....tt........... CONSENSUS/65% ......................t.hhptuDlshsNLEsslss.....pt........... CONSENSUS/50% ......................pthlppuDlslsNLEoslost...hss........... 368407.Memar_0679_from_5_to_22------------------------------------VNTT--PPEAGE-FLKEAG----F CONSENSUS/80% .......................................hp...t.ht.hltths....h CONSENSUS/65% .....................................htapsssphht.sLppsG....h CONSENSUS/50% ....................................hhsFpusPcsls.sL+suG....h 368407.Memar_0679_from_5_to_22DILSVANNHTLDRGREGFENTLEGLESRGIAYVGGGRGDNP--------PEGLVVEHNGT CONSENSUS/80% shhshANNH.hDht.tuh.pThthhpt.sl.hhGst.p..............hh..htuh CONSENSUS/65% cslslANNHshDhGhpGlhcTlptLcptslthhGsuts.tp.tt........hhhphpGh CONSENSUS/50% DllslANNHshDaGpcGlp-TlcsLcpsGlstsGuGps.sc.sp......hsslhplsGh 368407.Memar_0679_from_5_to_22RFGFLAYTSG--------------------RFR-----SPPGVTVAKLK----------- CONSENSUS/80% phshlsh..................................................... CONSENSUS/65% cluhluhs........................shths.tp.ths.h.............. CONSENSUS/50% +lAlLuaohh.....................suhssspspsshssh.............. 368407.Memar_0679_from_5_to_22----------------------------------------------------KKAVIDDI CONSENSUS/80% .......................................................h..th CONSENSUS/65% .....................................................tthttpl CONSENSUS/50% .....................................................tplppcl 368407.Memar_0679_from_5_to_22RALKDRCD--------HVVVSLHWGIEN--------------------TYYPSP-----D CONSENSUS/80% tthct.........schhls.hHhG.ph....................t..s........ CONSENSUS/65% tth+tt........sDhlllthHWGhEh....................thtPs.....tt CONSENSUS/50% cps+pp........uDlVlVshHWGsEa....................sppPs.....sp 368407.Memar_0679_from_5_to_22QVRLAHAFIDNG------ATLILGHHSHTIQGLERYKGG--------------------- CONSENSUS/80% phthuc.hhc.u......schlhGppsHhhpshEhhptt..................... CONSENSUS/65% QpphA+thl-tG......sDlllGpHsHVlpshEhhpsp..................... CONSENSUS/50% QcclA+pLlDsG......ADlVlGHHPHVlQslEhY+uc..................... 368407.Memar_0679_from_5_to_22-----------LIAYSLGNFQFDT CONSENSUS/80% ............lhYuhGshh.s. CONSENSUS/65% ...........hlhYSLGNFl.st CONSENSUS/50% ...........hIhYSLGNFlssp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |