O67057|O67057/1 SAIKVIPEYERAVVFRLGRVIG--------AKGPG-LIIVIPIIDRI------------- CONSENSUS/80% ..hhhl.t.pthlh.phsth.p........hht.G.hhhh.shhpph............. CONSENSUS/65% tshhhltptctslh.RhGch.p........shtsG.lhhhlPhlcph............. CONSENSUS/50% sslpllspscpullpRlG+lpc........shsPG.lphllPal-ch............. O67057|O67057/1 ------VRVSLRTVTLDVPTQDV-----ITKDNVTVQVDAVVYFR-VVDPVK----AIVE CONSENSUS/80% ........hshp.....h....h.....hopct..l.lshhh.hc.h.s........hht CONSENSUS/65% ......hhhshphtshpssstph.....hopDphhlplsthlhh+.lhs.ht....thhp CONSENSUS/50% ......pplslRtpshclsspps.....lT+DslslslDssVhaR.lsDshp....ulhs O67057|O67057/1 VEDYFY-----ATSQIAQTTLRSVCG---------------------------------- CONSENSUS/80% h.shp.......h.thhpp.l+thlu.................................. CONSENSUS/65% stshph.....slpphspssl+shlu.................................. CONSENSUS/50% lpshch.....slpslsposLRullG.................................. O67057|O67057/1 -----EAELDELLS----------QREKINMKLQEIIDRQTDPW---GVKVIAVELKKI- CONSENSUS/80% .....phthpphhp..........tcttltt.h.p.hpp.hp.h...ul.l.phplpph. CONSENSUS/65% .....phslsplhs..........p+pplsttlpp.lsptspsa...Glpltplplpph. CONSENSUS/50% .....chsL--llo..........pRsplspplpcslscpscsa...GlclscVcIccl. O67057|O67057/1 -----DLPEELRKALARQA CONSENSUS/80% .....p.s.ph.pshtt.. CONSENSUS/65% .....phstphhpuhttph CONSENSUS/50% .....chPp-lpcAhpppt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |