P11B_HUMAN HEPSIPENLEDKLYGGKLIVAVHFE----------NCQDVFSFQVSPNMNPIKVNELAIQ CONSENSUS/80% ....hs......h.ssplhl.lhh.............p..hshphs.spss.plht.hhp CONSENSUS/65% ssh.hPp.h..hhhssplhlslhh...........ttp.shohphs.spsstplhpphhp CONSENSUS/50% suhpsPcslh.+shsuplllslahc..........spppsholclssssTscslhpphlp P11B_HUMAN K---RLTIHGKEDEVSPY------DYVLQVSGRVEYVF-GDHPLIQFQYIRNCVMNRALP CONSENSUS/80% p....hs.ht..c.t.........pahlclsGhppal..sph.Lhphphlppph..tt.. CONSENSUS/65% c...hhshhs.scsss........cahL+lsGhs-alh.ssh.Ltphphlpppl.ptpts CONSENSUS/50% K..hptSlhsps-sss........-YlLKVsGpsEYlt.scasLssacaI+sslpsuscs P11B_HUMAN HFILVECCK CONSENSUS/80% ph.lht... CONSENSUS/65% plsLhphst CONSENSUS/50% cLsLhshss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |