7739.JGI130473_from_1_to_156MRKRYSRLTAL--LFAGFA--VLV--WILLFNML--DHEGGCTTQHLTY----MCGLYAD CONSENSUS/80% hRhs.h+h+hl..hhshhs..lhlhohhlahpYt..saschCpsp.sp.....lCppapp CONSENSUS/65% sRhshh+hKYL..hhsWLu..lhluSWllYhpYu..oYoELCRuc.Cchh...ICccYc+ CONSENSUS/50% uRlshl+lKYL..FluWLu..VFVGSWVVYVpYS..SYoELCRGHsC+th...ICD+Y++ 7739.JGI130473_from_1_to_156GKVQGPLCDAMCSEQLT-VH-SCLSNRPEKQ---VLHVSWEQRGPWDTSHDHPEVILKF- CONSENSUS/80% GhlsGshCpslCtppplhht.pChps.stpp...hh.s.W.........tth..sll+s. CONSENSUS/65% GhlsGshCssLCpppslhht.pClospsspp...lapu.W.........tshp.sllKC. CONSENSUS/50% GlIoGSsCsuLC-ccTLahs.+CLSspPssQ...VYoGsW.........p-pp.lVIKC. 7739.JGI130473_from_1_to_156--VRTWYETFNQPQPLSDTNLDYSYLIERQAHHM----CMEHFQSDESC---HRFGQRT- CONSENSUS/80% thtp..p.th.........pp.-...h.pssps.....s.pcacphlhshh.tphG.p.s CONSENSUS/65% thp-shphphts-....t.Rc.EhshappPo+GT....ohpcF+-MlhsalcsplGcpss CONSENSUS/50% phpEsh+t-hss-...spPR+.EtsLF-+PT+GT....Sh--F+EMltsalKuKLG-Qss 7739.JGI130473_from_1_to_156----------VLNA CONSENSUS/80% h....thht.llth CONSENSUS/65% h...ssLlspllsh CONSENSUS/50% L...ssLVsplLul
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |