Q50247/1-79 LSRFSASPTSGK-----APLTVSFTDQS--------------TGAPAAWRW--------- CONSENSUS/80% .h.h..t..............h.hps... ...............hth.W......... CONSENSUS/65% ssthssssst........s.slpapsps. ...........sst.hsapW......... CONSENSUS/50% sushsssssssh.....sspsVsFssss. ...........sGsslsapW......... Q50247/1-79 -TF-GDG-----------------------SGSRE----KNPVHTYNES----------G CONSENSUS/80% .sh.sst...........................t.....t.shta.ps..........G CONSENSUS/65% .sh.GDu.......................pstpt....tsssasasps..........G CONSENSUS/50% .sF.GDG.......................ssssu....sssoHoYscs..........G Q50247/1-79 QYTVTLTASNANG-----------------------------------------SNALTK CONSENSUS/80% .aphplts.st............................................sp..h CONSENSUS/65% pYslplsspssss.........................................ssstsh CONSENSUS/50% sYsVsLolssssG.........................................osotos Q50247/1-79 SRYIVVS CONSENSUS/80% .h.l... CONSENSUS/65% plhltss CONSENSUS/50% slpVsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |