Q52V44-2670-2928 ETVVTAL---AQAHVRGVEVDWAAFFA-------------------GTGAERIDLP--TY CONSENSUS/80% HsL.Lus...hht.stttthhh........................plsht..t.saLs. CONSENSUS/65% HPL.LGs...slphssssshhhps......................cluhp..spPWLu. CONSENSUS/50% HPL.LGA...sVslusssuhlhTu......................RLSss..spPWLA. Q52V44-2670-2928 AFQR---QRYW-PETVLSTVGP---VVAE--AV--------DAVDARFWDAVER------ CONSENSUS/80% .......-Hhl..s.slhPusu...hl-h..Ah........tAutphhss.......... CONSENSUS/65% .......DHtV.tGslllPGsu...alEh..Al........pAuspsssst......... CONSENSUS/50% .......DHsV.tGsVllPGsA...alEL..Al........cAuccsGsss......... Q52V44-2670-2928 ----------------EDLASLVAELDV-----------DETPLGE-------------- CONSENSUS/80% ................lp-lhhttsLhl...........sttsth............... CONSENSUS/65% ................lc-LslpsPLlL...........stpssht.............. CONSENSUS/50% ................l-ELslcsPLVL...........P-suulp.............. Q52V44-2670-2928 --VVPAL-------------SAWRRERRAQSEVDGWRYRVSWKPLADASTAR-------- CONSENSUS/80% ..lplhl..............tt...................hplhup............ CONSENSUS/65% ..lplsl...........stssts.......utt........hplaSc............ CONSENSUS/50% ..lQlsV...........sss-ss.......GpRs.......lslaSR............ Q52V44-2670-2928 -------------------------------LSGS----WVVVSPDKGVDDSAVVAGLA- CONSENSUS/80% .................................... ..WhhH...........upuhl. CONSENSUS/65% .................................... ..WspH...........AsGhl. CONSENSUS/50% ....................t............... ..WopH...........AoGsL. Q52V44-2670-2928 --------------------------------------GRGAEVRRVVVEAGVDRSALAG CONSENSUS/80% .........................................ts..........h...tt. CONSENSUS/65% ........................................sssssssshs.sshssssst CONSENSUS/50% .......................................ssssssssssssssWPPsuAs Q52V44-2670-2928 LLADAGSAAGVVSLLGLDESEGLLGTVGLVQALGDAGVEAPLWCLTRGAVSVGRSDRLVS CONSENSUS/80% ............................................................ CONSENSUS/65% sht......................................................... CONSENSUS/50% sls......................................................... Q52V44-2670-2928 PVQAQVWGLGRVAALEVPEHW--------------------------GGL---------- CONSENSUS/80% ...tthYtthtthGhtaGPsF..........................psl CONSENSUS/65% ..hsshYpphsttGhtYGPsF..........................pGl CONSENSUS/50% ..lsshYcpLAstGhsYGPuF..........................pGL Q52V44-2670-2928 ------------------------------------------------------------ CONSENSUS/80% CONSENSUS/65% CONSENSUS/50% Q52V44-2670-2928 ------------------------------------------------------------ CONSENSUS/80% CONSENSUS/65% CONSENSUS/50% Q52V44-2670-2928 ------------------------------------ CONSENSUS/80% CONSENSUS/65% CONSENSUS/50%
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |