Q6RKL3-1814-2125 GS--LDSLQF-----------VEDQSHAAELGPRD--VE-IEAMAWGL-TSR-------- CONSENSUS/80% G...lpslth.....................tssp..lc.ltlhusul.NF+........ CONSENSUS/65% Gs..LpsLph.............tsttttshsssp..Vc.lpVpAsGl.NFR........ CONSENSUS/50% Gs..L-sLpa.............sssspssLusup..Vc.lcV+AuGL.NFR........ Q6RKL3-1814-2125 -------------DLD-ISLG-----HP---------------DKRTEEFGS--GCVGVI CONSENSUS/80% .............Dlh.hshGh....hs.....................hGh..-huGhl CONSENSUS/65% .............DVh.hAhGh....hs..................ts.hGh..EsuGhV CONSENSUS/50% .............DVL.lAhGh....lP.................sssslGs..EsAGlV Q6RKL3-1814-2125 TRI----GKKCSN---------TIRV--GDRVAMV-SP---G---CMRKYPRAN-EV--- CONSENSUS/80% htl....G.tsp..........thts..GcpV.huhh....s...shushshsp.tp... CONSENSUS/65% stl....GssVs..........shts..GD+V.hGhhs...G...shushshss.tp... CONSENSUS/50% scV....GssVo..........slsl..GDRV.hGlss...G...uauotlss-.sc... Q6RKL3-1814-2125 ----CVFKIP-------------------DSLSFKDAVSL-TLPSLTACHSVLNVA--RI CONSENSUS/80% ....hhh.hP...................tthohtpAAsl.PhsahTuhauLhphu..tl CONSENSUS/65% ....hlhtlP...................pshohtpAAol.PssahTAaYuLhclu..pl CONSENSUS/50% ....hlsclP...................cuhSas-AAol.PlsasTAaYuLh-LA..cL Q6RKL3-1814-2125 Q--EN--DK------VLIHSAADSAGQIAIRLAQ--TLG-----------------AQVF CONSENSUS/80% p...G..pp......lLlHuusGGVG.AAlplAp..hhG.................scla CONSENSUS/65% p..tG..-p......VLIHuusGGVG.AAlplAp..thG.................AcVa CONSENSUS/50% +..sG..Eo......VLIHAAuGGVGhAAIQlA+..phG.................AEVF Q6RKL3-1814-2125 ATLPTAAEKQSII-DTL---GLSVEH--IFNSNS-------PS-LADDIK-------RVT CONSENSUS/80% sTs.o.tKhthL..p.....ul..pp..lhsSRs.......ht.Ftpthh.......t.o CONSENSUS/65% uTs.SttKtphL..cth...Gl..s+..lhsSRs.......hs.Ftpplh.......ttT CONSENSUS/50% ATAGSssK+chL..+sh...GlspcH..IhsSRs.......ss.Fscplh.......psT Q6RKL3-1814-2125 G-------------------------------------GEGVD----------------- CONSENSUS/80% t.....................................utGlD................. CONSENSUS/65% s.....................................GpGVD................. CONSENSUS/50% s.....................................GcGVD................. Q6RKL3-1814-2125 ----------LLLHCS--QDTL----RT--LL-SCVTDGGRVVSLHIR--------DNS- CONSENSUS/80% ..........lVLNSLs.tchh....pt..oh.phls.hG+FlEhGKt........Dhh. CONSENSUS/65% ..........lVLNSLu.G-hl....pu..Sl.chLu.tGRFlElGKp........Dlh. CONSENSUS/50% ..........VVLNSLu.GEhl....cA..Sl.clLAssGRFlElGKp........Dlp. Q6RKL3-1814-2125 ----ESSTVAVE--------------------ILSRNLTFSSIDM----LR----LK--- CONSENSUS/80% ....tst.ls.......................hh.shta.shsl...........t... CONSENSUS/65% ....ssppls.......................ht.slsapuhDL.t..h.....tt... CONSENSUS/50% ....ssspluh.....................shcpsloYpulDLsp..hh....ss... Q6RKL3-1814-2125 PKVLR-------------------QLA-ETMMQL-QAEDK-------------IQPPQP- CONSENSUS/80% sthht...................thh.tplhth.httsh.............ltsh... CONSENSUS/65% sphhp...................pll.tplhph.htpGh.............lpPlss. CONSENSUS/50% Pcplp...................clL.s-lhsL.hssGs.............LcPLPs. Q6RKL3-1814-2125 -------LPAFKI-----------SDI-----KDGFKQLQQE---NTV-ERVIV------ CONSENSUS/80% .......h.h..............tph......tAhRhhtpu...pHh.GKlll. CONSENSUS/65% .......psash............pcs.....tpAFRhhppu...+Hh.GKlVl. CONSENSUS/50% .......ssass............scs.....pcAFRaMupu...+Hl.GKlVL. Q6RKL3-1814-2125 --- CONSENSUS/80% CONSENSUS/65% CONSENSUS/50%
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |