Q2T4N2-1240-1675 LAIIGIA------------------LRVPG----------------------------AA CONSENSUS/80% lAllGhu..................sRhPs............................st CONSENSUS/65% lAIlGhu..................sRaPG............................ss CONSENSUS/50% IAIVGMu..................CRaPGs...........................us Q2T4N2-1240-1675 DARAFWR--------NLREGRS-----ALERLDARRLMAHGVASALAGARQ---TVGVRA CONSENSUS/80% s.pthWp.........l.tGhs.....sht.hs.pRh...t..............s..us CONSENSUS/65% ss-phWc........hLtpGt-.....slsphPscRh...thh.ts..tt.ttthsptGu CONSENSUS/50% oP-caWc........lLpsGcD.....uloclPs-RhsststhhssssstsGpshs+pGG Q2T4N2-1240-1675 ------------------TIADKHRFDAEFFG-VSMR--DAALMDPQARQLLQ------- CONSENSUS/80% ..................hlpthstFDstFFs.lssp..EA..hDPQpRlhLp....... CONSENSUS/65% ..................alcshstFDstFFu.ISP+..EAhtMDPQQRLhLE....... CONSENSUS/50% ..................FL--sspFDAsFFG.ISPR..EAtsMDPQQRLLLE....... Q2T4N2-1240-1675 -----------------------------HAWLAFED----------------AGY---- CONSENSUS/80% .............................hsacuhEp................AGh.... CONSENSUS/65% .............................suWEAlEc................AGh.... CONSENSUS/50% .............................suWEALEc................AGl.... Q2T4N2-1240-1675 ------------------VPADAPDT----------AVFVS------------------- CONSENSUS/80% ................sstthtspth..........GVahG................... CONSENSUS/65% ................sstslpGops..........GVFsG................... CONSENSUS/50% ................sPssLcGocT..........GVFlG................... Q2T4N2-1240-1675 --ASHSRYAAKQADGARAAAEAVLDDPADYVG--WIL-----EQGGTIPALISYKLGLTG CONSENSUS/80% ..h..tpY..h..t...............................shhusRluahhshpG CONSENSUS/65% ..shtp-Ytthhttsstth......................tsstuhhusRluYhhsLcG CONSENSUS/50% ..ssssDYsshtspsssshts................ahhsGsssSlluuRlSYtLsLcG Q2T4N2-1240-1675 P--------------------SLY-VHTNCSSSLAALYAAWQTIRAGDAKQALVAAATLF CONSENSUS/80% P....................uhs.lDTACSSSLsAlH.AspuLpts-sshAlsGGsslh CONSENSUS/65% P....................uls.lDTACSSSLVAlHhAspuLRsGEsshAlAGGVslh CONSENSUS/50% P....................olo.VDTACSSSLVAlHLAsQuLRsGEC-lALAGGVslh Q2T4N2-1240-1675 ADERLGYVHQPGLNFSSD---------------------GRIKTFDRN---------AD- CONSENSUS/80% htsthhh.hsp.thluss.....................GpC+sFstt.........As. CONSENSUS/65% hsPthhhthuptthLusD.....................G+C+sFsss.........AD. CONSENSUS/50% hoPssalsaS+tphLSsD.....................GRCKuFDuu.........AD. Q2T4N2-1240-1675 GMVPGEGVVAVLVKRVAEAL-ADGDR----------IYAIVRDVALNNDGAAKAGFYA-- CONSENSUS/80% GhshuEGsuhlllctLppA..tsuc...........lhullpuoulNpsGtst.uhos.. CONSENSUS/65% GhshuEGsGsllLcRLu-Ah.pcGct..........lhAVl+GoAlNpDGtos.GlTs.. CONSENSUS/50% GashGEGlGlllLKRLSDAh.RDGDp..........IlAVIRGSAVNpDGsSs.GLTA.. Q2T4N2-1240-1675 -------------------------------PSVRGQAQVIDALL-RRTGVRAA------ CONSENSUS/80% ...............................Pss.uQttllptsh.ttutlsst...... CONSENSUS/65% ...............................PsssuQpplIcpAl.tpAulsst...... CONSENSUS/50% ...............................PNusuQpcVIRpAL.ssAGlsPs...... Q2T4N2-1240-1675 --DIVYVE----------AHGTGTQ-IGDPIEVAALTDA--------------------- CONSENSUS/80% ..plshlE..........uHGTGT..lGDPlEhtulhts..................... CONSENSUS/65% ..slshVE..........AHGTGTt.LGDPIEhpALhts..................... CONSENSUS/50% ..-VsYVE..........AHGTGTs.LGDPIEspALsss..................... Q2T4N2-1240-1675 ----------YRAHGAGTGHCG--LGS--VKTN------------------------VGH CONSENSUS/80% ...........htttp.ttt.hh.lGS..lKoN........................lGH CONSENSUS/65% ...........hspspstptshh.lGS..lKoN........................IGH CONSENSUS/50% ...........aGps+ssspPLh.LGS..VKSN........................IGH Q2T4N2-1240-1675 LD-TAAGLVGLVKVA-----------------LSLEQR---------------------- CONSENSUS/80% hp.uAuGluulhKhl.................hthppt...................... CONSENSUS/65% hp.uAAGlAGlIKsl.................Luhc+t...................... CONSENSUS/50% sE.AAAGlAGlIKsV.................LAL+Hu...................... Q2T4N2-1240-1675 --------------------------------MLPPSLNFDAPNPALDLASSPFYVVERA CONSENSUS/80% .................................ls.shphpt.ss.lshtt..h.l.pp. CONSENSUS/65% ................................hlPssLahppsssplcasssslpl.sch CONSENSUS/50% ................................tlPsoLHhcpPNPclDassuslplso-s Q2T4N2-1240-1675 TPI----------------------------------------APRAGRTFAAVSAF--- CONSENSUS/80% h.W...........................................tt.+hAulsuF... CONSENSUS/65% psW.........................................tsspsRRAuVSSF... CONSENSUS/50% psW........................................sssscPRRAGVSSF... Q2T4N2-1240-1675 ----------------------GVGGTNAHALVEAHR CONSENSUS/80% ......................GhuGoNuHlllcph. CONSENSUS/65% ......................GhuGTNAHlllEpss CONSENSUS/50% ......................GhuGTNAHVILE-uP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |