Consensus terms for the PKS_MT domain 

Q9KIZ6-2712-28   ----------------------------------------------------LRTWNVFC
CONSENSUS/80%    h.p.lPGhShh..hht.p.p......t.hphhhttptthtthlattlchpthp+VhDhGC
CONSENSUS/65%    hpchlPGFSWl..hht.p.p......pthchhhpuppth+plLFpulcasshp+VhDhGC
CONSENSUS/50%    LpEhlPGFSWLhslYpsspps.....Eat-lLLpuQRELRsVLFRGVDFSol++VLDFGC


Q9KIZ6-2712-28   AAGE---------------------------RHTIDELLVRLQISAVYRKV---------
CONSENSUS/80%    GhutDlltLupths+LplpGhslSstQhthstpplcthulptRltlh.pDSu+p..h.st
CONSENSUS/65%    GausDLlsLucpasHLpLcGasISs-Qsthscp+lcshGLpsRIplatRDSu+D.sFPsp
CONSENSUS/50%    GYuoDLIsLA++HPHLpLHGYTISu-QAclu+cRIRucGLpsRIplasRDSAKD.sFPsp


Q9KIZ6-2712-28   ------------IKRWMDHLVAIGVLVGDGEHLVSSQPLPEHDWAAVLEEAATVFADLPV
CONSENSUS/80%    YDlhhuhpVhtHItp+.slFsNlupplpsGGhhlhu-hlus..hsslp..csssh...ss
CONSENSUS/65%    YDLhhuhpVhpHItcKtsLFuNIu+pLpsGGhLlhA-hluN..hosIpht-ossa...ss
CONSENSUS/50%    YDLlaGFEVlsHI+-KssLFuNISRsLpsGGaLVhADFIANs.lSuI-cpEoooY..hlo


Q9KIZ6-2712-28   LLEWCKFAGERLADVLTGKTLALEI---LFPGGSFDMAERIYQD-----------SPIAR
CONSENSUS/80%    htcWsclhuppthcllpslDho.Ehu.aL.Dstattphppl.p..t.pt.hppthpshtt
CONSENSUS/65%    hp-Ws-lLucppL+lV-uVDho.ElupFLaDssFppphcplsp..t.s-hs+cphpuhcp
CONSENSUS/50%    tpEWAELLARNsLRVVEuVDlSpElANFLaDPsF-cNLERlocp.sh--ls++sFcuh+s


Q9KIZ6-2712-28   YSNGIVRGVVESAARVVAPSGTFSILEIGAGTGATTAAVLP
CONSENSUS/80%    huphLp+tlhsYhLhhhpKsp.hs...lhphNttphts.hP
CONSENSUS/65%    hGphLp+tLhuYsLhhlpKDphhs.pplt+lNptpLushhP
CONSENSUS/50%    lGcuLcKGLsSYuLllVQKD-ptcsspLcRlNpc+LuALsP

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T