GM25027_1 HDMTLPLSHYFIYTGHN---------------------------------SYLTGNQLSS CONSENSUS/80% ...p.PLschhIsuoHN.................................oahhspphtu CONSENSUS/65% pDhspPLucYaIsoSHN.................................TYLhscQltu CONSENSUS/50% pDMspPLSHYaIsSSHN.................................TYLsG+QlsG GM25027_1 DCSDVPIINALKRGVRVIELDIWPNASK------DNIDVLHGRTLTTPVELIRCLRSIKD CONSENSUS/80% .sp...ahp.LptGsRhl-lchhss.st ...hlhHu..hh..l.hppslcsIpp CONSENSUS/65% .sospsYhpsLppGsRslElDhasusss .psllhHGhshhptlthpcVlcsI+c CONSENSUS/50% cSSsEuYIpsLcpGCRClELDsWDGsDG .cPllaHGaThTopIpLp-Vl-sIKc GM25027_1 HAFVASEYP--VVITLEDHL--TPDLQAKVAEMVTETFGDLLFTPNSESVKE------FP CONSENSUS/80% hhhhss.hs..lllohc.th. s.tppthhsphhpphhsc.hh..s..st........hP CONSENSUS/65% aAFhsSsaP..lIlolcpah. s.ppQthhsphhcplhu-hLhspshpsspp......LP CONSENSUS/50% aAFssSsYP..VILSLEsHC. us-QQcpMAphh+ElFGDhLascPscuscp......LP GM25027_1 SPESLKKRIIISTK CONSENSUS/80% s.tph+t+Illh.+ CONSENSUS/65% oPppL+pKIllps+ CONSENSUS/50% SPcpL+cKILLKsK
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |