3702.AT1G09370.1_from_24_to_168EKTQQRVNG--ICKQ--TM------DTRF---CSSLLIKNL-----NTFPAS---NKEIM CONSENSUS/80% ....t.lpt...Cp...s.........th...Chp.l..............s.....thh CONSENSUS/65% ttspphlps..hCpt..o.........ph...Chpsltt.......tt.tss....tplh CONSENSUS/50% ssssshlps..hCss..Ts......assh...ChsoLss......sssssss...spcLs 3702.AT1G09370.1_from_24_to_168NVTV-SEAERFAANTYFFISTLLR----------NAG-----DERPDLQACAEAYAIV-N CONSENSUS/80% .hsh.p.shtphpthhthhtphht...........t........ttshttChp.ht.s.h CONSENSUS/65% phsl.phshspsppshthhpphhp..........hp......ptptshpsChchhpps.h CONSENSUS/50% csul.psslspsspstshlssltc........pspsp.....pscsulccCh-hacsu.l 3702.AT1G09370.1_from_24_to_168SAFTKAVT-FF-----------------KQAYYSK-IVNIEKKVSMAVDICKT-DFNV-- CONSENSUS/80% ttltpsht..h....................th.p.hp.hhssshs..tsC.p.shtt.. CONSENSUS/65% spLppuhp.th.................httphss.hpshlSuAhss.poChc.shpp.. CONSENSUS/50% -pLpculp.sl.................pppshsc.lpoaLSuAlospsTCpD.uFsc.. 3702.AT1G09370.1_from_24_to_168-----------LGYQINPLIEKNR--QTKILLSMEQIV CONSENSUS/80% ................p.hh......th.phhs.slsh CONSENSUS/65% ............sthpp.ltptht..phpphssssLul CONSENSUS/50% ...........ssshpsslppphs..slpclsSNuLAl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |