DP3B_ECOLI/1-3 VSGPLGG-RPTLPILGNLLLQVAD--GTLSLTGTDLEMEMVARVALVQP-------HEPG CONSENSUS/80% stpsl.p.+sshPhhsslhlpspp..ttl.hpuss.phthps.l.hp..........p.G CONSENSUS/65% sppslsp.+sshPlLuslLlpspc..pplslsuoDhclulcsplstp.t........ppG CONSENSUS/50% ls+slss.RsslPlLoslLLsuc-..cpLolouoDh-lSlcsplsspls........psG DP3B_ECOLI/1-3 ATTVPARKFFDICRGLPEGAEIAVQLEG-------ERMLVR-SGR-------SRFSLSTL CONSENSUS/80% phhl.uchh.clhptLsp.t.lplphpt.......p.hhlh.stp.......sphpL.sh CONSENSUS/65% plhl.u+hh.-ll+pLss.p.lplphpp.......pphhlp.ssp.......opFsLssl CONSENSUS/50% slllsu+hlsDIV+sLP-.splslshc-.......splllp.oG+.......ScFsLsTL DP3B_ECOLI/1-3 PAADFP--NLDDWQSEVEF------TLPQATMKRLIEATQFSMAH-QDVRYYLNGMLFET CONSENSUS/80% ssppaP..ths.ht.t.th......tlstp.htphlpps.auhup.p-sp.hLsGl.hph CONSENSUS/65% ss--aP..plsphptthsh......plssshLpchIppstFAhup.p-s+.hLsGlhhch CONSENSUS/50% su--FP..pLsplspsssh......plssslL+chIccTsFAlSp.cEoRhhLsGVplcl DP3B_ECOLI/1-3 EGE----ELRTVATDGHRLA---VCSMPIGQSLP------------SHSVIVPRKGVIEL CONSENSUS/80% ptp....tlhhsuTDuaRLu...hhph.ht.t...............hshllPt+sl.pl CONSENSUS/65% pps....plhhsATDuaRLA...lpchphppptp.............hslllPtKsltEl CONSENSUS/50% ssc....pLpsVATDGHRLA...lpclslcsssst...........pasVIlPsKuLpEl DP3B_ECOLI/1-3 MRMLDG---GDNPLRVQIG-------SNNIRAHVGD--FIFTSKLVDGRFPDYRRVLP-- CONSENSUS/80% .+hhsp....tt.lpl.hs.......pt.hhh.hts..hhhhspll-GpaPchppllP.. CONSENSUS/65% t+hhss....tp.lslhls.......ssplhhphss..hhhto+Ll-GpaP-appllP.. CONSENSUS/50% s+lls-...sc-slsIhlu.......sspltFcscs..hphsS+Ll-GcFPDYcplIP.. DP3B_ECOLI/1-3 KNPDKHLEAGCDLLKQAFARAAILSN-EKFRGVRLYVS--ENQLKITANN----PEQEEA CONSENSUS/80% pp.pt.hhhptt.hhpslpRhtllup.tp.t.lphphp..ts.ltlpu.s.....-hups CONSENSUS/65% pchpsplslspptlhculcRsulLus.p+spsl+lplp..psplplsuts....s-hGps CONSENSUS/50% c-assplslssccLpcAlcRlulLus.p+spsV+Lols..cspLclouss....sElGcu DP3B_ECOLI/1-3 EE--ILDV------TYS---GAEMEIGF----NVSYVLDVLNALKCENVRMML--TDSVS CONSENSUS/80% .E...hss.......h....Gp.hpIuF....Nspalh-slpshpspplphth...ss.p CONSENSUS/65% pE..plss......phh...GcslpIuF....NspYllDsLpslcopplplph..ssssp CONSENSUS/50% cE..-lss......shp...GEcLsIuF....NspYLlDuLKulco-clclpF..ssusp DP3B_ECOLI/1-3 SVQIEDAA-SQS--AAYVVM CONSENSUS/80% shhlps.s.p.p.....llh CONSENSUS/65% Phllpsss.spp..ht.llh CONSENSUS/50% Psllssss.csc..hpallM
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |