Consensus terms for the POX domain

Q9SIW1           SGFTRTIHNSKYLKAAQELLDETVNVKKALKQFQ---------------PEGDKINEVK-
CONSENSUS/80%    .shh..lhsS+ahpssQplLpEhssht.t.hptt...............s...pss.st.
CONSENSUS/65%    huhsphLhsS+YL+uAQELL-Ehsslspshhptph.t..........sps..ppsstsss
CONSENSUS/50%    pGslppL+uSKYLKAAQELL-EFCsVu+uthscsp.st........tssPsussssssss


Q9SIW1           EKNLQTN------TAEIPQAERQELQSKLSKLLSILDEVDRNYKQYYHQMQIVVSSFDVI
CONSENSUS/80%    -t.tuss.sst..........h.chph+KsKLlshl-EVpppYppYhpQhphlhsuFc.s
CONSENSUS/65%    -sssusutsup...s...t.-ch-hQp+KsKLLSML-EV-+RYppYpcQMQhVluSF-ts
CONSENSUS/50%    EsssGousuuppsPs.lusu-RtElQ+KKuKLLSMLEEVDRRY+cYp-QMQsVlSSF-sl


Q9SIW1           AGCGAAKPYTALALQTISRHFRCLRDAISG
CONSENSUS/80%    hGhssA.sYoshA.pshS+pF+sL+sulst
CONSENSUS/65%    sGhGuApsYTsLALpshSRpFRsL+-AIus
CONSENSUS/50%    AGLGAApPYTuLALKslSRHFRCLKDAIAu

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T