Q9SIW1 SGFTRTIHNSKYLKAAQELLDETVNVKKALKQFQ---------------PEGDKINEVK- CONSENSUS/80% .shh..lhsS+ahpssQplLpEhssht.t.hptt...............s...pss.st. CONSENSUS/65% huhsphLhsS+YL+uAQELL-Ehsslspshhptph.t..........sps..ppsstsss CONSENSUS/50% pGslppL+uSKYLKAAQELL-EFCsVu+uthscsp.st........tssPsussssssss Q9SIW1 EKNLQTN------TAEIPQAERQELQSKLSKLLSILDEVDRNYKQYYHQMQIVVSSFDVI CONSENSUS/80% -t.tuss.sst..........h.chph+KsKLlshl-EVpppYppYhpQhphlhsuFc.s CONSENSUS/65% -sssusutsup...s...t.-ch-hQp+KsKLLSML-EV-+RYppYpcQMQhVluSF-ts CONSENSUS/50% EsssGousuuppsPs.lusu-RtElQ+KKuKLLSMLEEVDRRY+cYp-QMQsVlSSF-sl Q9SIW1 AGCGAAKPYTALALQTISRHFRCLRDAISG CONSENSUS/80% hGhssA.sYoshA.pshS+pF+sL+sulst CONSENSUS/65% sGhGuApsYTsLALpshSRpFRsL+-AIus CONSENSUS/50% AGLGAApPYTuLALKslSRHFRCLKDAIAu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |