YSD1_CAEEL-442 IRTMDIFRLIHICKKIFTVQKSMVEID------GPVRICGDLHGQYPDLIRLF------- CONSENSUS/80% h.tp.hh.lh.tstplh.tp.shhthp......s.lhlhGDhHGph.Dlh.lh....... CONSENSUS/65% hptpplhtlhppspplhpppssllclp......sPlslsGDlHGQhpDLhplh....... CONSENSUS/50% lscc-lhpllppsccllpp-ssllcls......sPlsVsGDlHGQasDLlclF....... YSD1_CAEEL-442 -------AQVLGGFPPDSNYLFLGDYVDRGSFN-LEVILLCLAYKARYPNNF-----MML CONSENSUS/80% ........thtt...spp.alFhGDYVDRG..s.lEslhhLhsh+lhaPpph.....hlL CONSENSUS/65% ........phss..sspppYlFLGDYVDRG.hu.lEslhLLhshKlhaPsph.....hLL CONSENSUS/50% ........ctsG.ssssssYLFLGDYVDRGsaS.lEsllLLauhKltYPs+l.....aLL YSD1_CAEEL-442 RGNHEVIHIN---------EKYGFKDEVFNRK-GEYHDELYPEFNEMMDMMPLVALVGGR CONSENSUS/80% RGNHEs..hs..........hYGFhtEh..ch....t.phh.hhpphashhPlssllspp CONSENSUS/65% RGNHEstthN.........thYGFhcEhth+h....ttplaphFppsFshhPluullspc CONSENSUS/50% RGNHEosslN.........phYGFh-EsppKa....stclachFs-sFshLPLuALlss+ YSD1_CAEEL-442 ILCMHGGLSQ-------HIKSLD-DLRNLRRP------------------FHSEDECLEN CONSENSUS/80% lhshHGGls........t.tshc.pltth.p....................t..p.s.hh CONSENSUS/65% lLChHGGlSs.......plpslc.plpplc+...................tp.sppshhh CONSENSUS/50% ILCMHGGLSs.......clpoLD.cl+plcR..................spcssccGlhh YSD1_CAEEL-442 DIMWSDP-------------------------------AKVSGWTANP-RGASVQFG-EN CONSENSUS/80% -lhWuDP ...............th..s..RGhuh.Fu..s CONSENSUS/65% DllWuDP ...........tp..sat.st.RGsuhhFG..s CONSENSUS/50% DLLWSDP ..........sssspGassos.RGsuahFG.sc YSD1_CAEEL-442 EVKEMCKLLDIDLIVRGHQVVQ-----------DGYEFFAGK--KLVVCSITVFSAPHYM CONSENSUS/80% hspphhpp.plphlhRuHphh............pGaphhhpt......cllTlFSus.Yh CONSENSUS/65% ssppahpp.slchIlRuHphh............-Gachhtsp......+llTlFSAPpYp CONSENSUS/50% llccFLccpsLcLIlRuHQlVp...........-GYcahtcp......+LlTlFSAPsYC YSD1_CAEEL-442 QSFTNSAAVCKVSAGLEVS-----FEVLKPEDIRVEEIK CONSENSUS/80% tt.sNhuuhhpl............tpsh..th..h.... CONSENSUS/65% sphsNtuuhhpl............spshphph..hpst. CONSENSUS/50% sptsNtAAllpl............scshphphhphpssp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |