P2C2_SCHPO/1-27 HSSSGGDRW-LHFGV-----SHMQGWRISMEDAHCALLNFT------------------- CONSENSUS/80% .............sh ........t.p...pD.h....t..................... CONSENSUS/65% .p..thsht.hthuh .....t..shctphEDshhhh.s..................... CONSENSUS/50% pspsstsss.hshGh ....sshputRpshEDsasspssh.................... P2C2_SCHPO/1-27 -------DSNSSNPPTSFFGVFDG-------------HG--GDRVAKYCRQHLP--DIIK CONSENSUS/80% .................hhulhDG.............pu..u.tsuphhtp.h...phh. CONSENSUS/65% .............tphthhulaDG.............+u..Gspsuphstpplh..phlt CONSENSUS/50% ............ppshshauVaDG.............HG..GscsucasscpLt..ctlt P2C2_SCHPO/1-27 SQPSFWKG---------------------------------------------------- CONSENSUS/80% p........................................................... CONSENSUS/65% ppht..tt.................................................... CONSENSUS/50% cphppppsp................................................... P2C2_SCHPO/1-27 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ P2C2_SCHPO/1-27 ----NYDEALKSGFLAADNALMQDRDMQED------------------------------ CONSENSUS/80% .......phl.psh.thptth.t..................................... CONSENSUS/65% ....thppslppuahphcpphhpt.................................... CONSENSUS/50% ....psccslccuFhpsDccltpptpt................................. P2C2_SCHPO/1-27 ----------------PSGCTATTALIVDHQ----------------------------- CONSENSUS/80% ..................Gsshhhhhh.ttp............................. CONSENSUS/65% .................sGsTussshlttpp............................. CONSENSUS/50% ................tuGoTAllullsssc............................. P2C2_SCHPO/1-27 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ P2C2_SCHPO/1-27 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ P2C2_SCHPO/1-27 -------VIYCANAGDSRTVLGRKGT---------------------------------- CONSENSUS/80% ........hhhuphGDstshlhptt................ ............... CONSENSUS/65% ........lhluNsGDS+sllsppsp............... ............... CONSENSUS/50% ........LalANlGDSRAlLscssp............... ............... P2C2_SCHPO/1-27 ---------AEPL-SFDHKP---------------------------------------- CONSENSUS/80% .........hh.h.o.ppp......................................... CONSENSUS/65% .........hhtl.ot-Hps........................................ CONSENSUS/50% .........shpL.opDH+P........................................ P2C2_SCHPO/1-27 ------------------------NNDVEKARITAAGG---------------------- CONSENSUS/80% .............................h.cl........................... CONSENSUS/65% ........................tt.tEhtRlpttts...................... CONSENSUS/50% ........................sspsEtpRIcpsGG...................... P2C2_SCHPO/1-27 ---------------------------------FIDFG-----RVNGS---LALSRAIGD CONSENSUS/80% ...........................................th.s....hths+shGt CONSENSUS/65% .................................hl..t.....+l.u....lsloRuhGc CONSENSUS/50% .................................hltps.....RlsGs...LslSRAlGD P2C2_SCHPO/1-27 FEYKKDS----------------------------------------------------- CONSENSUS/80% h..h........................................................ CONSENSUS/65% h.hc........................................................ CONSENSUS/50% hphK........................................................ P2C2_SCHPO/1-27 ----------------------------------SLPPEKQIVTAFPDVVIHNI------ CONSENSUS/80% ..........................................h.s.sph..h........ CONSENSUS/65% .........................................hl.stPclphhph...... CONSENSUS/50% .........................................hlsupP-lspppl...... P2C2_SCHPO/1-27 -------------------------------------------------DPDDEFLILAC CONSENSUS/80% ............ .....................................ptphhlhss CONSENSUS/65% ............ ...................................tppschllluo CONSENSUS/50% ............ ...................................sscD-FllLAS P2C2_SCHPO/1-27 DGIWD--------------CKSSQQVVEFVRRGIVARQSLEVI----------------- CONSENSUS/80% DGlap..............hhstpphhphhpt............................ CONSENSUS/65% DGla-..............shsspcssphlpp.h.......................... CONSENSUS/50% DGLWD..............slosp-ll-ll+pph.......................... P2C2_SCHPO/1-27 -------------------------------------------CENLMDRCIASNS---- CONSENSUS/80% ...........................................htp.l.p.hht...... CONSENSUS/65% .......................................t..tssptlhphshtt..... CONSENSUS/50% .......................................ssppsucpLsctAlsp..... P2C2_SCHPO/1-27 --------------ESCGIGCDNMTICIV CONSENSUS/80% ...................ttDshohhll CONSENSUS/65% ..................tspDshollll CONSENSUS/50% ..................supDNlTlllV
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |