Q94710/2361-24 YTTHSDCQIASN----------------KCTTN----G-------TGCIALG-----A-C CONSENSUS/80% h.sps.Ctsh..................tChst....u.......ssC.t.......s.C CONSENSUS/65% htocspCpsh.s................sCsss....G.......suChsht.....s.C CONSENSUS/50% ssTcusCpuats................sCTss....G.......ouClsts.....usC Q94710/2361-24 SSYT--------S--QAGCYFNDKGAVLQS-GAIVSTG-LCTWDT--TAS--------SC CONSENSUS/80% sth............pttC............t........Chh................C CONSENSUS/65% ssh.........s..pssC.hs.........s........Chass.............tC CONSENSUS/50% usY.........ss.pssCsps.s.......ut......pChWsss............sC Q94710/2361-24 RD-------QTCA CONSENSUS/80% ht.......tpCs CONSENSUS/65% hs.......psCs CONSENSUS/50% ts.......csCu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |