AF1952_ARCFU PSDVSNSLLYFGLIIGFTAFILLAVKFSA------------------------------- CONSENSUS/80% ..t.hs.hhhh.h.hhhohhllhhahhhp............................... CONSENSUS/65% htshhsshhhlhhlllhohhLllLYhahp............................... CONSENSUS/50% hsuslssllhlshlllsoslLllLYpacs............................... AF1952_ARCFU ---------------------------------------------------VLKAVIYFL CONSENSUS/80% ..................................................h.hhhhhhhs CONSENSUS/65% .................................................hhhlhhhlhhs CONSENSUS/50% .................................................ahhlhthllhu AF1952_ARCFU TFLSIFYVLSPF------------------------------------------------ CONSENSUS/80% .hhhhhhh.hhh....h........................................... CONSENSUS/65% shhllhhhshlhhh.hh........................................... CONSENSUS/50% slullshashlhhhplh........................................... AF1952_ARCFU ----------------------------------IGILAIPLSIGVVILLIKKP-----Y CONSENSUS/80% ...................................thhhh.hshuhhhhhhhhht....h CONSENSUS/65% ...............................hshhplhlhhhshullshhhlhhpt...t CONSENSUS/50% ..............................shshhslllhlhshullGhaslah+t..hc AF1952_ARCFU WLVINFSALMLAAGITAIFGISLEPLPVIILLAVLAAYDAISVYRT--------RHMIKL CONSENSUS/80% h....hhhh.hhhshh.hhhls...hsshhlLssh.hYDlhhVhhs........phhlph CONSENSUS/65% hhtt.llsluhhhsllhhhhLP...hsshllLssl.lYDlhhVhss....t...phhVps CONSENSUS/50% WhtsslluluhslulltlhtLP..hhouhlLLuultlYDlluVaso....pss.+lMVEl AF1952_ARCFU AESVTAINAP----------------------MLFIIPR--------------------- CONSENSUS/80% Apt.tts.......................hP..hh.s...................... CONSENSUS/65% Apths-s......................hhPthlh.sh..................... CONSENSUS/50% Aputs-s......................lFPsllhpsthh................... AF1952_ARCFU ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AF1952_ARCFU ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AF1952_ARCFU ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ AF1952_ARCFU ------KDGNAYMGVGDAVMPNILVVSAQYFSN--------------------SPSVGFI CONSENSUS/80% .......t.h.hlGhGDhlh.ulhlshs.hh.........................t..h CONSENSUS/65% .....ttpphshLGLGDhlh.ulLVuhsttas.......................tshsh CONSENSUS/50% ...spspppsshLGLGDllhPulLVupAspas.......................schsh AF1952_ARCFU KLPALFALIGGFAGLMILLYIVEKRGGAHPGLPFVNFGAIAGYILGSVLF CONSENSUS/80% hhsshluhhhGLhhshhhhhhhpt...u.PAL.h.lshslhh.hhhthhh CONSENSUS/65% hhushlAhhlGLhlThllltlh+p...A.PAL.h.lshslhhhhhsshhh CONSENSUS/50% hlAsalAhhlGLslTllLLsla++...ApPALPYllsssLlhhhssuhlh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |