3891508/1-131 SATCSFSVKYLGCVEVFESR--------GMQVCEEALKVLR------------------- CONSENSUS/80% ..s.thtshalGth.h.t.p. ......s.thhttshpph.................... CONSENSUS/65% .tshpaplpYlGslplsptp. ......u.phhppslpplp................... CONSENSUS/50% ssuspFpVpYLGslcVscsc. ......GssslscAlcclpt.................. 3891508/1-131 ------QSRRRPVRGLLHVSGDGLRVVDDETK-----------------------GLIVD CONSENSUS/80% ......t......th.h.ls.ttlplht.ptt... ...............hhhp CONSENSUS/65% ......stttphpphhlplohpslplhstpsp... ..............thlhp CONSENSUS/50% ....hsussppspslplplSscul+Llsscsc... ..............plltc 3891508/1-131 QTIEKVSFCAPDR-----------------------------NHERGFSYICRDGTTR-- CONSENSUS/80% h.h.plphhs.s...............................p.phhuhlhpp.st... CONSENSUS/65% hslppIoahuts..............................ppschFuals+ctss... CONSENSUS/50% aslppISFsuss..............................scscsFuals+csssp.. 3891508/1-131 ------------------RWMCHGFLACKDS---GERLSHAVGCAFAVCLERKQRRTRA CONSENSUS/80% ...................h.hash.stt.t......h..shhthh.hhht...ttp.. CONSENSUS/65% ..................phtCHlFtsppst.....tlstsltpsFphthptthpppp. CONSENSUS/50% ..................chpCHVFpCscss....pplspultpAFpssappppspspt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |