Q64604/1-259 KFSQEYESIDPGQQF-----------TWENSNSEVNK----------------------- CONSENSUS/80% .h.tthtph.t...................s.h.ts........................ CONSENSUS/65% thtpcappltp.t.............shptuph.pNh....................... CONSENSUS/50% slpcEFcclpstpsst..........stssuppscNp....................... Q64604/1-259 -------PKNRYA-----------------NVIAYDHSRVLLTSIDGV------------ CONSENSUS/80% .......t+NRh..................sl.sh-tsRVhLt................. CONSENSUS/65% .......pKNRat.................slhshDpoRVhLps................ CONSENSUS/50% .......sKNRYs.................sllPaDcoRVpLsstst............. Q64604/1-259 ---------------------------------------------PGSDYINANYIDGY- CONSENSUS/80% ...............................................ssYIpAshlth.. CONSENSUS/65% ..............................................sssYINAsalps.. CONSENSUS/50% .............................................tssDYINAsalcuh. Q64604/1-259 ----------------------RKQNAYIATQGPL------------------------- CONSENSUS/80% .........................ttaIhsQsPh......................... CONSENSUS/65% .......................ttppaIsTQuPh......................... CONSENSUS/50% ......................ppscsaIATQGPL......................... Q64604/1-259 -----PETMGDFWRMVWEQ---RIATVVMMTRLEEK------------------------ CONSENSUS/80% ......pThtcFWpMlhpp...ps.hllhlsp..E......................... CONSENSUS/65% ......pThtDFWpMlapp...psthIVMLsp.hEt........................ CONSENSUS/50% .....ssTlsDFW+MVW-p...csssIVMLophhEp........................ Q64604/1-259 --------------------SRVKCDQYWPAR---------------------------- CONSENSUS/80% ....................t..pstpYaP.t................... CONSENSUS/65% ....................sp.+CtpYaPpp................... CONSENSUS/50% ....................u+pKCspYWPpc................... Q64604/1-259 -------------------GTETYG-------LIQVTLVDTVELA--------------- CONSENSUS/80% ......................ht.. ...h.lp.hp.t.................. CONSENSUS/65% ..................t.hpau.. ..thplphhp.ppht............... CONSENSUS/50% .................tsstsaG.. ..slpVshpsscpts............... Q64604/1-259 ----------------------------------------------------TYTMRTFA CONSENSUS/80% ....................................................thhhp.ht CONSENSUS/65% ....................................................phhh+php CONSENSUS/50% ....................................................saslRslp Q64604/1-259 LHKSGS------------------------SEKRELRQFQFMAWPDH-----GVP----E CONSENSUS/80% lp..t............................h.lhphpahsWsch.. ..shP..... CONSENSUS/65% lpttt..........................pscplpphpahsWP-p.. ..ssP..... CONSENSUS/50% lppssp........................tcs+pVppapassWPDc.. ..GlP....p Q64604/1-259 YPTPILAFLRRVKACNPLD-------------------------------AGPMVVHCSA CONSENSUS/80% ....hhphhp.hpp......................................PhllHCps CONSENSUS/65% pstshlphlphlcphtt.................................tsPllVHCSu CONSENSUS/50% sspslLchlcpV+pppstt...............................suPllVHCSA Q64604/1-259 GVGRTGCFIVI-DAMLERMKHEKT------------------------------------ CONSENSUS/80% GhGRoushhsh.thhht.httt...................................... CONSENSUS/65% GlGRoGsalsl.phhhpplpppt..................................... CONSENSUS/50% GlGRTGTFlul.-hllpplcspps.................................... Q64604/1-259 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q64604/1-259 -----VDIYGHVTCMRSQRNY-MVQTEDQYVFIHEALLEAAM CONSENSUS/80% .....hsh.thltthRtpR.h.hlps.tQa.hhhtshhthh. CONSENSUS/65% .....hslhphlpplRppRst.hlQo.pQYhalapslhphht CONSENSUS/50% .....l-lhslVcplRsQRss.hVQTppQYtFlacsllchlp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |