44689.DDB_0191093_from_23_to_142LDLA----------------------YITDN------DLAYITDNIV--------AMGFP CONSENSUS/80% hslRpEshh..................hsst....shs.+t.tp.h...........s.p CONSENSUS/65% lsLREEsll.................alssp....sashRp.ps.hps.......hsuhs CONSENSUS/50% lsLREEsVl.................alNGp....PaoLRcscsstpsh......hsGls 44689.DDB_0191093_from_23_to_142S---EKVEGVFRNPMKDVQRF---------LDQYHKDHFKVY------------------ CONSENSUS/80% ....ttltthE.phhtplh................ts.hhhh.................. CONSENSUS/65% t...pplEthEtpl+p-lht............t..tshhhht..p........t..s.h. CONSENSUS/50% s...splEslEppLKc-llpp..........spphsGtllla.p-hpsh....ph.sphp 44689.DDB_0191093_from_23_to_142NL-CSERVYDHSKFYGR-------------VGYY--PFD-DHNAPQFE--MIDAFCRDVD CONSENSUS/80% .h...pph.s.p-lhtt....tt.t.......Y.Rlsls.tpt.P..t...hs.hhphht CONSENSUS/65% .h.t.pslho.pElapp....tshp.....hpYhRlPls.cppsPtpp..shDthlphlp CONSENSUS/50% pl.stcsVpTscElacp.httpuhs.....lpYpRlPlo.DcpuPp-s..-lDtllchl+ 44689.DDB_0191093_from_23_to_142A------WMKEDSKN-----------IAVIHCKAGKGRTGLMICCWLMYC CONSENSUS/80% t............ts............hhhpCp.GhsRTohhhhhhshhh CONSENSUS/65% p.........tspss...........shlFsCphGtGRTTssMlhssllh CONSENSUS/50% s........tsssss...........ullFsCpsG+GRTTTuMVlusLlt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |