GI|4050087/15-9 DSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHS----------SPQSILDDVA CONSENSUS/80% .p+h..chhcsWlsc+lh-hLG.p-ssllpahhsplpt............s.pthh.plp CONSENSUS/65% .s+hhh-hh+PWIsK+lhEhLGhE-csll-alhsplct............shpthh.pls CONSENSUS/50% ssKlpp-cI+PWIsK+VpElLGhEDDoLV-FIluplcspt..........sssuKLpcls GI|4050087/15-9 MVLDEE---AEVFIVKMWRLLIYETEA CONSENSUS/80% hhh..p...ut.Fh.chaphLh.t.tt CONSENSUS/65% lsh..-...ucpFltclWphLl.ttps CONSENSUS/50% LTsFE-.cpA-cFVsKLWcLLIpcpps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |