YMT4_YEAST/1-12 FQPTDIVLAKVKGFSAWPAMIIPNELIPDNILKTKPVSVHKGKSGSDKKANEDIDADMES CONSENSUS/80% ht.t-hVhsKhtuas.WPuhlhp..................................... CONSENSUS/65% hpss-lVhuKhpGashWPAhlhp.p................................... CONSENSUS/50% acsGDLVWAKh+GFPWWPAhVlsp+tsssshh............................ YMT4_YEAST/1-12 EARDREQSEEEEDIEDFGESEANPEKFIIYTPVLKFRKNDT-LKSTYCVKFFCD CONSENSUS/80% .........................t...hh.V.aFss.ph..hh..pplhsh. CONSENSUS/65% ......................t.pth.shh.VhFFsstch.tahs.splhshs CONSENSUS/50% ......................ps+utssphhVhFFscpca.uWlssscLhPLs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |