Q13596/1-128 DQFDL-TVGITDP---EKIGDGMNAYVAYKVTTQTSLPL-----------FRSKQFAVKR CONSENSUS/80% ..h...h..ht..........t...hhhhtlpht.......................h.+ CONSENSUS/65% tthht.hthhp..........tpphhhhhplpppss..................thplhR CONSENSUS/50% ssltp.hsllssp....t.tsspptaallplpspss.................pppplpR Q13596/1-128 RFSDFLGLYEKLSEKHSQN-----------------------------GFIVPPPPEKSL CONSENSUS/80% pap-F..hpp.L.t.h............... .. ............hhlP.hP.t.. CONSENSUS/65% +as-FhtLcppLtpphs.............. .. ...........thhlP.hPtcth CONSENSUS/50% RYS-FppL+spLpccas.............. .. ...........pptlPslPsKph Q13596/1-128 IG-----------------------------------------------------MTKVK CONSENSUS/80% ............................................................ CONSENSUS/65% h........................................................... CONSENSUS/50% hst......................................................... Q13596/1-128 VGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQ--------DPDVREFLEKE CONSENSUS/80% ........tphhppRt..Lptalptlht...h.t........s..hhpFht.t CONSENSUS/65% .......ppphhccRcttLppalpplhpts.hhp........schlhpFlpsp CONSENSUS/50% ......hscchl-cR+psLppYLpplsppPhlss........schltcFLpss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |