160492.XF1029_from_365_to_629KPFFDQYLIDGASKA------------DTPPVLIYNTG--------------ENHWDRMQ CONSENSUS/80% htahstaLhs.tt..................h.hh..t...............tta.t.. CONSENSUS/65% hpaaspaLcu.ps................s.hpha.ts...............tpWhs.s CONSENSUS/50% lcWFD+aLKGp-ss.............t.sslclapps..............sspWcsts 160492.XF1029_from_365_to_629HWPRSCERGCEYTSKPLYLNAG--------GTLSFQTS-----QRKQNDYDEYISDPANP CONSENSUS/80% ta............t.hhh.................................h..ts.p. CONSENSUS/65% sas.......ththpthhhts.............................shhspsPtps CONSENSUS/50% sWPss.....psphsshaLsst.........................tssshhspsPscs 160492.XF1029_from_365_to_629VPFMPRPINFKDNAM------------------WTTWLVQDQR-------------FVDN CONSENSUS/80% h....................................h..stt................. CONSENSUS/65% s.thst.h.............................h.tspp................. CONSENSUS/50% ssshGthhshhs.........................sss-pp...............tt 160492.XF1029_from_365_to_629RPDVLTYLSEPLTTPLQIAGVPRINLHASTSG--------TDSDWVVKLIDVYPDEIAS- CONSENSUS/80% ....hhh.s.shtpthtl.G..thplhhtsst........sth.h.stl.cht....... CONSENSUS/65% ..tshsa.otslppshplhGtsplpLphssst........sssslhspL.-lsst..... CONSENSUS/50% cssslsFsosPLsc-lclsGsPplcLpluuss........scuclsVpLsDlsss..... 160492.XF1029_from_365_to_629-------------DPKMGGNELAISL------------------GIFRGRYRTSFQYPT- CONSENSUS/80% ..................t....ht...................uhhpht.h........ CONSENSUS/65% ..................stsh.ls...................Ghhphp.cp.ttt.t. CONSENSUS/50% .................tGpstplot..................GhlclspRpssspsp. 160492.XF1029_from_365_to_629--------------------PMTPNQPLLYRFDLPNVNHTFLTGHRIMVQVQSSLFPLYD CONSENSUS/80% .............................hphtl.sh.hhh..Gppltl.l.ss.h.hh. CONSENSUS/65% .....................h.ssp.hplplpLtssshph.sGc+lpltlsussashh. CONSENSUS/50% .....................ltsGphhslclcLpssuashtsGHRLRLsluoosaPhhh 160492.XF1029_from_365_to_629------------RNPQRYVPNIFFAKPDDYIKATQRIWHTPRQPSFIE CONSENSUS/80% ....................................hh......s.h. CONSENSUS/65% ..............................h.ttpthhtsshtsotlh CONSENSUS/50% .............t.th......hshs.phtssppplhpsstssSplt
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |