Q25547/122-346 APTSFDWRQHG---AVTR--VKNQG---ACGSCWTFSTTGNVEGQWAIKKG--------- CONSENSUS/80% hPtthDhRpph...hss...l+sQu...tCGuCWAFushushps..hhtpt......... CONSENSUS/65% lPpshDWRpcs...slos..l+sQG...pCGSCWAFussuulEuhhtltss......... CONSENSUS/50% lPcslDWRc+G...sVTs..VKDQG...sCGSCWAFSusuAlEuthpIpoGt........ Q25547/122-346 ---------------------KLVSLSEQQLVDCDHNCVTYQNQQACDS----GCN-G-G CONSENSUS/80% .......................htlStppllsCs..................GCp.G.G CONSENSUS/65% ......................hlsLScQpLlDCst....t............GCs.G.G CONSENSUS/50% .....................pLloLSEQpLlDCss...tsp...........GCs.G.G Q25547/122-346 LMWSAF---------------------QYVIK-NGGLDTE-----DSYPYEGVDDT---- CONSENSUS/80% ....uh.....................pahhp...sh..t.....tshPY.h.pt..... CONSENSUS/65% h.ttAa.....................palhpp.hslss-.....ssYPYputpst.... CONSENSUS/50% hhspAa.....................cYltcs.sGlsoE.....ssYPYsupcss.... Q25547/122-346 ----------------CRF---------NKS--NVAATI---------SSW--------- CONSENSUS/80% ................C.............t.................pth......... CONSENSUS/65% ................Cph..........tp..thh............psa......... CONSENSUS/50% ................Cch........psps.sssss.h.........cua......... Q25547/122-346 ------------------------TSISS-----DENQMAAWLAANGPISIAINAEW--- CONSENSUS/80% ..........................h........pt.hhthhh...shsshhthtt... CONSENSUS/65% ..........................hs.t....sEptltphlsttsPlusslsuss... CONSENSUS/50% .........................slsts....sEptLpcslupssPluVul-Aus... Q25547/122-346 --LQYYTS-------G-ISDPS--------WFCN-PQ-------DLDHGVLIVGYG---- CONSENSUS/80% ..h.hYpt.......G.lhtt...........st.t..........sHuVhhlGaG.... CONSENSUS/65% ..FphYps.......G.lapt..........tCstt.........hsHuVhlVGYG.... CONSENSUS/50% .tFphYcu.......G.lYss..........sCuss.........lsHAVllVGYG.... Q25547/122-346 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q25547/122-346 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q25547/122-346 --WLGSEENYWIVKNSWGSD-------WGED-GYFRIIRG-----KGKCGLN-SVPSSSI CONSENSUS/80% ......tt..YWll+NSWutt.......WG-p.Gahph.ps......s.Csh....ssh. CONSENSUS/65% .....tsstpYWll+NSWGsp.......WG-p.GYh+htRs......spCGl.sthsuhs CONSENSUS/50% .....psGscYWIVKNSWGss.......WGEs.GYhRltRst.....spCGI.uphuuhP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |