Consensus terms for the PhBP domain

Q9NFM5/33-140    TMDQCKQELGLPDSV----INDLYNFWKDDYVMTDRLAGCAINCLSTKLDIVDP-DGNLH
CONSENSUS/80%    hhptChpphths.t.......p..p.........p.thtChh.Chhpphthhst.ttthp
CONSENSUS/65%    hhppChpchshspt.....htchhphhp.s....spphtChhtChhpchshhss.psphp
CONSENSUS/50%    st-pCtcEhslo-s.....lt-hhsttcps....sccscCahpClhcKhsll-c.sGclc


Q9NFM5/33-140    HGNAKEFAMK--HGADDGMAQQLVDIIHRCEKSTPPN---------DDKCTKTMDIAMCF
CONSENSUS/80%    htthht.h............tth.thhptCtt..tt.............C.hshphhpCh
CONSENSUS/65%    tcthhphht........t.tpphhphlppCtpppst...........ptCphshphhpCh
CONSENSUS/50%    p-sshchhst.....ssphscplpsllcsCpsppsst.........pDsCspAachscCa


Q9NFM5/33-140    KKEI
CONSENSUS/80%    .tt.
CONSENSUS/65%    ppth
CONSENSUS/50%    cpsp

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T